Syngnathoides biaculeatus (alligator pipefish): 133507607
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Entry
133507607 CDS
T09681
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
133507607 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133507607 (xpc)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133507607 (xpc)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
133507607
NCBI-ProteinID:
XP_061688823
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Position
2:10618661..10633254
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AA seq
911 aa
AA seq
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MVKRRGSKADVDIKKSKQVLTGAKEKVKKKDAGCDNAEEEEKLKRRVIPKRRSSSGQGDG
NVSKRSIGIIGTKHFQSPAKIEDNKLSNNDYDEMMSSVTPVRDDVKEEKEESEEEDDDWE
EVEELAEPLDTAETSEPVLPSQPVEIEIETPEVRKKQKRKAEFEMYLRRMMNRYKKDLVI
DTHKVHLMCLLASGMFHNRLCSEPDLLAVTLSLLPAHFSAVAKERKDHNYICGLLKWFQA
TFTLNPSLPYEERPNPRTLLERRLASLSAKNHQEMTHLFMLVLRSLQLFCRLVLSLQPIP
LKPPPAKAKGATTSSVSLAKTNQTQEITKTSSTEQKVSPGTKRPARGIKSAKDRGGKKAK
REPLKEEEVEADEKITLSGGQRPKNSKRRSIASKVSYKEESNSENEVESSDEDFQAFSEE
DSDDSKSGTKTVKGVKSEERSKSKSKDKKKRNQKKMSGVENDEENHEEGEKRMSSSKGKQ
KGMIKKNGFGADEWLEVFVDKTSSWVCVDVEHGVGEPHRCFQNATWPVTYVVGVDGDGFL
KDLGRKYDPTWMTLTRRRRVEEEWWEETLQPFQRPQDERDIKENKEMEKKLLNKPLPISI
TEYKNHPLYALKRHLLKYEAIYPDTAAILGYCRGEPVYSRDCVHTLHSKDTWLKEARTVR
IGELPYKMVKGFSNRSRKARMMTEQKDANDLALFGEWQTEVYQPPIAVNGKVPRNDYGNV
YLFKACMLPVGCVHLKLSNLHRVAKKLDMDAAPAVTGFDFHGGYSHAVTDGYIVCEEHEE
ILKAAWEEEQEVQKQREKEKREKRAISNWTQLVKGLLIRERLKQRYGTKGQATGGLRPPT
TDGDKCDGLSSDEGGVGEEENTSAKTALETLALSWPQNRQAEEEKGGSVSRKKTKLERRA
KEKHLFPFEKV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagcgaagaggatctaaggcagatgtcgacataaagaagtcgaagcaggtgctg
acaggagcgaaagagaaggtgaagaaaaaagatgcaggttgtgacaatgcagaagaggag
gagaagctcaaaaggagggtcattccaaaacgacgttcctcctcaggccaaggagatggg
aatgtctcgaagaggtccattggtatcatcggcacgaaacacttccagtcaccagcgaag
attgaagataataaactcagcaataatgattatgatgaaatgatgagttccgtcacccca
gtgagagacgatgtaaaggaggaaaaagaggagagtgaggaagaggatgatgactgggag
gaggttgaagaactggctgagcctctggatacagcagaaacctcagaaccagtcctgcca
tctcagcctgtagagatagaaattgagaccccagaagtccgaaaaaaacagaagaggaag
gcagagtttgagatgtacttgagacggatgatgaaccgttacaagaaggacctggtgata
gacacacacaaggtgcacctcatgtgtctgttagccagcgggatgttccacaaccgcctg
tgcagtgaacccgacttgctggctgtcactctgtcattgctccccgctcactttagtgca
gttgccaaggaacgcaaagaccacaactatatatgtgggcttttaaaatggtttcaagca
actttcaccctcaaccccagtcttccttacgaggagcgtccaaaccctcggaccctattg
gagagacgtctggccagcctgtcggcaaagaaccaccaggagatgactcatctcttcatg
ttggtcctcaggtctctgcaactgttttgccgcctggttctttctctgcagcctattcct
ctcaaacctccaccagctaaggccaaaggagccacaacttcttctgtctcactagcaaag
acaaaccaaacccaggaaataactaagaccagctcaactgaacagaaagtgtctccaggc
actaagaggccagctcgaggaataaagagtgccaaagaccggggaggaaaaaaagccaag
agggaaccattaaaggaagaggaagtagaggcagacgagaagattaccttgtcaggaggc
caaagaccaaagaactccaaacggcgcagcattgcctcgaaggttagctacaaagaagaa
agcaacagtgaaaatgaggtggaaagtagtgatgaagactttcaggcattcagtgaagaa
gacagcgacgattcaaagagtgggaccaaaactgtcaagggagtaaagagtgaagagaga
agcaaaagcaaaagcaaagataaaaaaaaaaggaaccagaagaaaatgagtggtgtcgaa
aatgacgaggagaatcacgaggaaggtgaaaaaagaatgtcgagcagtaaaggaaagcaa
aaggggatgataaagaaaaatggttttggagctgatgagtggttggaggtgttcgtggac
aaaacctcctcgtgggtatgcgttgatgtggaacatggagtgggagagcctcaccgctgc
ttccagaatgcaacatggccagtcacgtatgtggtgggtgtggacggagatggctttctg
aaggaccttggccggaagtacgaccccacctggatgacattgaccaggaggaggcgggtg
gaggaggagtggtgggaggagacgctgcagccgtttcagagaccacaagatgagcgggac
ataaaggagaataaggagatggaaaagaagttgctgaacaaacccttgcccatctccatc
actgaatacaagaaccacccactgtacgccttaaagagacacctgctcaagtatgaagcc
atctatcccgacacggctgccatacttggatactgccggggagagccggtatactccaga
gattgtgtccacacgctacactccaaagacacgtggctgaaagaagcacggactgtcagg
ataggagaactaccctacaaaatggtgaaaggcttctctaatcgttcccgtaaggctcga
atgatgaccgagcagaaggacgcaaacgaccttgctctgtttggagaatggcagacggag
gtgtatcaacctccaattgctgtgaatggaaaggttccccgcaacgactacggcaacgtc
tacttgtttaaggcctgtatgctcccagtgggctgcgttcacctcaagctatccaacctc
caccgcgtggccaagaagctggacatggacgctgcccctgcagtcactggctttgacttc
catggaggatattcgcatgcggtcactgacggttacattgtgtgtgaggagcacgaggag
atcctcaaagctgcctgggaggaagaacaagaggttcaaaaacagagggagaaagagaaa
agagaaaagagggcaatctccaattggactcagcttgtgaagggccttctgatcagagag
cgtctaaagcagcgttatggcacgaagggccaggctacaggagggctccggccccctact
actgacggagacaaatgtgatggcctttcgtcggatgaagggggtgttggggaagaggag
aataccagtgctaaaactgcgttggagacactggctctgtcttggccccaaaacaggcaa
gcagaggaagagaaagggggaagtgtcagcagaaagaagacaaagctggagaggagagcc
aaagagaaacatttgttcccctttgagaaagtatga
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