KEGG   Syngnathoides biaculeatus (alligator pipefish): 133509840
Entry
133509840         CDS       T09681                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133509840 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbia03041]
    133509840 (cdc5l)
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133509840 (cdc5l)
Spliceosome [BR:sbia03041]
 Complex B
  Other components
   Prp19 complex
    133509840 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    133509840 (cdc5l)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    133509840 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 133509840
NCBI-ProteinID: XP_061693229
LinkDB
Position
12:1990718..1998935
AA seq 811 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGEDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIHIGKKRKKKRGVDYNAEIPFEKKPAAGFYDTSMEVYDPLAPNFK
RLRQQHLDGELRNEREERDRKKDKQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKMGVASEVARQAAEESENANGASSTLLSEYSIANTMNTGLRTPRTPAAQ
DRIMQEAQNLMALTNIDTPLKGGLNTPLHESDFSGVTPQRQQVQTPNTVLGTPFRTPVQG
QGSEGMTPQPAGELTPRGTATPGLTPARTPLRDKLNINSEEQLADPSYAKHLQRESLQQL
RHGLMSLPVPKNDFEIVLPENAEKELEETEMEVGYVEDAADVAARKQAQRDAEREKELKL
RHTAVRRGLPRPTEVNESVLRPSSMEPLSDLQVAEELIKQEMITMMHHDCLHHPGAAAAQ
PQRAKGRGPASASNNALHIAYLDAHPYNTVGTEDMEKAKAILAAEMEVVKVGMAHGDLSM
EAYCQVWEECYSQVLYLPGQNRYTRANLASKKDRIESVEKKLEVNRGHMTAEARKAAKLE
KKLKILLGGFQSRALGLLKQHNELWEQVEQAATELETFSQLKRQEDTAIPRRLEALREDV
ERQMDRERELQQRYGELVTERDALVNSAQKY
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgccgcgaatcatgataaaaggaggcgtttggcgcaatacggaggatgaaatcctcaaa
gcagcggtgatgaaatatgggaaaaatcagtggtctcgtatcgcctctttgctccatcgt
aagtcggccaagcagtgcaaagctcgatggtacgagtggctggaccccagcatcaagaaa
acagagtggtcccgagaggaggaggagaagctgcttcatctggctaagctgatgcccacc
cagtggagaaccatcgcgcccatcatcggccgcacggccgcccagtgcctggagcactac
gaatacctgcttgacaaggcggcgcagcgagacaacgaggaggaagtgggagaggacccc
aggaagttgaagcccggagagatcgacccaaaccccgagaccaaaccggcccggcccgac
cccgtggacatggatgaagacgagctggagatgctgtccgaggccagagcccgactggcc
aacacgcagggcaagaaggccaagaggaaagcccgagagaagcagctggaggaagccagg
cgcttggcggcgctgcagaagcgcagagagctgagagcggccggcatccacattgggaag
aagaggaagaagaagcggggagtggactacaatgccgaaatcccctttgagaagaaacct
gccgcaggcttctacgacaccagcatggaggtctacgaccccctggcgcccaacttcaag
cgtctccggcagcagcacttggacggcgagttgcgcaacgagcgcgaggagagggaccgc
aagaaggacaagcaaaagatcaagaagaagaaggagagcgacctgccctccgccatcctg
cagaccagcggcgtggccgagttcaccaagaagcgctccaaactggtcctgcccgcgccg
cagataagtgacgccgaactggaggaggtggtaaagatgggcgtggccagcgaggtcgcc
cgccaggcggccgaggagagcgaaaacgcaaacggcgcctcgtcgacgttgctgtcggag
tacagcatcgctaacacgatgaacacgggactccgcacgccgcgtacgcctgcggctcag
gacaggatcatgcaggaagctcagaatcttatggcgctgaccaacatcgacacgccgctg
aagggcggcctcaacacgccgctgcacgagagcgacttcagcggtgtgacgccccaacgg
cagcaggtgcagacccccaacaccgtgctcggcacccccttcagaactcctgtgcagggc
caagggtcagagggcatgaccccgcaaccggccggagagctgaccccgcgtgggacggcc
acgcccgggctgacccccgcacgcacgccgctcagggacaaactgaacatcaacagcgag
gagcagctggcagacccgtcgtacgccaaacaccttcaacgcgagagcctgcaacagttg
cggcacggcctgatgtcgcttcccgtgcccaaaaacgactttgagatcgtcctgcctgaa
aacgccgagaaggaactggaagaaaccgagatggaggtcggctacgtggaggacgccgcc
gacgtggcggcgcgcaagcaggcccagcgtgacgccgagagggagaaggagctgaagctg
cgacacacggcggtgcggaggggcctgcccaggcccaccgaggtgaacgagtcggtcctc
cggccgtcctccatggagccgctgtccgacctccaagtggccgaggagctgatcaagcag
gagatgatcaccatgatgcatcacgactgcctgcaccatcccggggccgccgccgcgcag
ccgcagcgcgccaagggccgggggcccgcgtccgcctccaacaacgccctgcacatcgcc
tacctggacgcgcacccgtacaacaccgtcggcacggaagacatggaaaaggccaaagcc
atcctggcggccgagatggaggtggtgaaggtgggcatggcccacggagacctcagcatg
gaggcctactgccaagtgtgggaggaatgttacagccaggtcttgtacctgccgggacag
aacagatacacccgagccaacctggcgtccaagaaagaccggatcgagagcgtcgagaag
aagctcgaagtgaaccgcggccacatgacggcggaggcacgtaaggcggccaaactggag
aagaagctgaagatcctcctgggggggttccagtccagagcgctgggtctgctcaaacag
cacaacgagctgtgggaacaggtggagcaagcggccacggagctggagaccttctctcag
ctgaagagacaggaagacacggccattccgagaagactcgaggcgttgcgcgaggacgtg
gagcgtcagatggaccgagagcgcgaactccagcagcggtacggagaactcgtgacggag
cgagacgccctggtcaatagcgctcagaaatactga

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