Syngnathoides biaculeatus (alligator pipefish): 133514690
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Entry
133514690 CDS
T09681
Symbol
cacna1aa
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133514690 (cacna1aa)
04020 Calcium signaling pathway
133514690 (cacna1aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133514690 (cacna1aa)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133514690 (cacna1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133514690
NCBI-ProteinID:
XP_061702531
LinkDB
All DBs
Position
16:complement(15403865..15468614)
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AA seq
2374 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDGDKTPLSGRLDATEMYFIGIFCFESGIKILALGFAFHKN
SYLRNGWNVMDFVVVLTGILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MIPLLQIGLLLFFAILMFAIIGLEFYMGKFHKTCFDNHTGEIREEFPCGTEPPSRLCPEG
TTCRKYWLGPNYGITQFDNILFAILTVFQCITMEGWTELLYYSNDASGSAWNWMYFIPLI
IIGSFFMLNLVLGVLSGEFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVLL
ADDENENDYDGSRRRATKNHKSKAELLNPEEGEGDLAVGSPFARASLKSSKLEGSSFKRR
ERRLRFFIRHIVKSQAFYWTVLCLVGLNTLCVAVVHYDQPEPLSDFLNYAEFIFLGIFLT
EMFVKMYGLGRQAYLNSSFNCFDCIVICGSIFEVLWSVIQPGTSFGISVLRALRLLRIFK
VTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFENGTPSTNFD
TFPAAIMTVFQILTGEDWNMVMYSGIKSQGGVNKGMAFSVFFIVLTLFGNYTLLNVFLAI
AVDNLANAQELTKDEQEEEEAASQKIALQKAKEVAEVSPLSAANLSIAANKVHSDCHSAT
DPFLDCKEQQKNHNKGLNKSVWEQRTKELRKQTLASSREALYNELDTEDRWKARTGREEH
NNVNYSRHVRPDMKTHLDRPLVVDPLENRNNNTNKNTDNNPDLCFTQQHPADDVHRQTRH
HERGCQGGPAKSPPERGESTESRRSRKSTHHHRSSHVRLDTTVIPGPGSEERPTRRHHHN
RSGSRGTGQSEHRRPRMHRKTDQEEDGREGTGKAGRHKNKGVDEGGEGGEKEAAADGGER
RPRRGRHSNQTEGEGKKMCQRRRKDGSVPNLSTTRPIQKRLSRQDSEDMDNLMNTKLVSD
SAPSNEHHPIPLANHTGDPGFESAFQLANSGARGSSVQLDSYGNVGHRRANSIIRQPRPD
HTAVDMPIFPSTNAILQVNKNANTEPLPAKEDKDDDDDAKGGDGGPRPMPPFTSMFILTT
TNPFRRACHYICTLRYFEMCILLVIAMSSIALAAEDPVWPDSTRNNVLRYFDYVFTGVFT
FEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIFAVVAVQLFKGRFFFCSDE
SKEFERDCRGEFLVYGRDNEVKAQKREWKKYEFHYDNVAWALLTLFTVSTGEGWPDVLKH
SVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLE
KNERACIDFAINAKPLTRHMPKNKLSFQYRMWEFVVSPPFEYTIMAMIALNTIVLMMKYD
GASDTYEAVLANLNIVFTSLFSMECVLKIIAFGALNYFKDAWNIFDCVTVLGSITDILVT
ELGNNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAMLFFIYAI
IGMQLFGNIAIEEDGEGAIDQHNNFRTFVQALMLLFRSATGEAWHEIMLACLGGKECDEL
SGNTEPECGSQVAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVR
IWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFN
STLMALIRTALDIKIAKISEGGIDKHQMDAELRKEMMAIWPNLSQKHLDLLVTPHKSATD
LTVGKIYAAMMIMEYYRQSKIKRSQALRDEQRVEPPSPTQDGGPGLNSALPPPETTETMS
SLPVEVGVPESHSWVTARAQEMSQKVGSWSPEDGLGSMTTSQTVEMREMGQDGYSDTEHF
PPMDGHGRAASMPRLPGDNQKRRKGKQRGSHLSTISDNSPMKRSASSLGHSRSGRASRDK
AGPNAYNMERVISEEGRASRHGHRRKERSHRASERSLCRYTEADTDTQQSGDLMSKDRDR
DRDRGRSKDRKHHHHHHHHHGSADKERYAAERGGEYVRKPSRDREPDRERERERDPRWSR
SPSEGRDCMTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPATPRPHVTYSPVVRKAV
PPQPVGPQGRAPVPAPRRLSPDAPQGQVPLAGIPPAHHAVPRQGHHPPLRWADADGGAIE
GDGCFYNQNYIPHHEPPTHEPGGNPHPHTHPLTSHPLPPPPQPQPRNLHALPPPQPHPIN
NPHPHPLPQYPQPNRTSPRTVHHVPPSGAPLQSQVQAPVQRRLPNGYRSSSPSTHLHGPQ
HSGPHKVPPPGGHPRGPRKGLHEPYCEKEQDDWC
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgattctcgccaccattattgccaactgcatcgtcctggccctggaacaacacttgccc
gacggtgacaagaccccactgtccggacgtctggacgctacagagatgtatttcattggg
atcttctgttttgaatctggtataaagatcctggctctggggtttgcattccacaagaac
tcgtacctgaggaatgggtggaatgtcatggactttgtggtggtcctcacagggattctg
tccaccgtgggctcagattttgacctgcggaccctgagagctgttcgagtcttgaggccc
ctcaaactggtgtctggtattcccagcctacaggtggtgctcaaatccatcatgaaggcc
atgattcctctgctccaaattggcctcctgcttttcttcgccattctcatgttcgccatc
atcggcttggagttttacatgggcaaattccacaaaacctgctttgacaatcacacaggc
gagatccgagaagagttcccatgtgggacggagcctccgtcgcgattgtgtccagagggt
accacgtgtcgaaagtactggctcggtccaaactacggcatcacccagtttgacaacatc
ctttttgctatcctcaccgtcttccagtgtatcacaatggagggctggactgaactgctg
tactatagcaacgatgcctcagggagcgcatggaactggatgtatttcatcccccttatt
atcatcggctccttctttatgctcaacttggtgctgggtgtgctgtcaggggagtttgcc
aaggagagggagcgagtggaaaacagaagtgagttcctgaagttgaggaggcagcagcag
attgaaagggaactcaacggttacttggagtggatctgcaaagctgaagaggttctcttg
gcagatgatgaaaatgaaaatgattatgacggctcccggaggagagccaccaagaaccac
aagagcaaagctgagcttctcaacccagaggagggggagggggacctggcagttggttca
ccttttgcccgcgctagcttaaaaagctcaaagttggaagggtcatctttcaagaggcga
gaaagacgactgcgcttctttatccgacacatcgtgaagtcccaggccttctactggact
gtactgtgtttggtgggcctcaacacgctgtgcgtggctgtcgtgcactacgaccagccg
gaaccgctttcagattttctaaattatgctgaatttatcttcctgggaatattcttgacg
gagatgtttgtcaagatgtatggtctgggaaggcaggcatacctcaactcctctttcaac
tgcttcgactgcatcgtgatctgcggcagcatatttgaagtgctgtggtccgttattcag
ccgggcacgtcattcggcatcagcgttttacgagctctcaggttattgaggatcttcaag
gtcaccaagtattgggcatctttaaggaaccttgtggtgtctttgctcaattccatgaag
tccatcatcagcttgctcttcctcctcttcctcttcatagtcgtcttcgccctgctggga
atgcaactcttcggaggacagtttaattttgaaaacggcactccttcaacaaactttgat
accttcccggcagcgataatgacagtttttcagatcctgacaggcgaagactggaacatg
gtgatgtattccggcatcaagtctcagggcggagtcaacaagggcatggccttctcagtc
ttcttcatcgtgctcactctttttggcaactatactctgctgaatgttttcttggctatc
gctgtggacaatttggccaacgcgcaggagctaactaaggatgagcaagaagaggaggag
gctgccagtcagaagatcgcattgcagaaagccaaggaggtggcggaagtcagccccctg
tcggctgccaacctctccatagcagccaacaaagtacacagtgattgtcacagcgctact
gacccctttctggactgtaaggagcagcagaagaaccacaataaggggctcaataagtct
gtgtgggagcagcgcaccaaggagctgaggaagcaaactctggcatccagccgagaagcc
ctctacaacgagctggacactgaagaccgctggaaggcaaggacggggagggaagaacac
aacaatgtcaactactcacgccacgtccgaccagatatgaaaactcacctggatcgacct
ttggtggtcgacccccttgagaatcgcaacaacaataccaacaagaacacggacaacaat
ccagacctctgcttcacccagcagcatcctgccgatgacgtccacaggcaaacgcggcac
cacgaacgcggctgtcaaggaggccccgccaaatctcctccagagcgaggcgagtcaact
gagagcaggcgtagccgcaaaagtacccatcaccatcgtagctcccacgtacgattggat
acaactgtgattcccgggccgggctcggaggagaggccgacgaggcgccatcatcacaat
cgcagcggaagtcgagggacgggacagtccgaacacaggagacctcgaatgcatcgcaag
actgatcaagaggaagatggtcgagaaggaactggaaaagctggaagacacaagaacaaa
ggggtcgatgaaggtggggagggaggagagaaggaagcagctgctgatggaggtgagagg
aggccgagaaggggtcgccatagcaaccagacggaaggcgaggggaagaaaatgtgccag
cgtcgacggaaggatggtagtgtaccgaacctctctaccacaaggcccatccaaaagagg
ctgtccaggcaggacagtgaagatatggacaacctcatgaataccaaattggtttcggac
tccgccccttccaacgagcatcacccaattccacttgccaaccacactggggaccccggc
tttgaatccgccttccaactcgctaacagcggcgctcgagggagttcggtccagttggac
agctacgggaacgtcggacatcgccgtgccaacagcatcatcagacagccccgccctgac
cacacagctgtggacatgccgatcttcccgtccaccaatgccatcctgcaggtcaataaa
aatgcaaacacagagcctttaccagcgaaggaggacaaagacgatgatgacgatgcaaag
ggaggtgatggaggacccaggcccatgcctccctttacctccatgtttatcctgaccacc
actaacccgtttcgtcgggcctgtcactacatctgcaccctgcgctacttcgagatgtgt
attctgctggtcatcgccatgagtagtattgcccttgctgccgaagaccccgtctggcct
gattctactcgcaacaatgtcctgcgttattttgactatgtcttcactggagtgttcaca
tttgagatgctaattaagatggtggacctggggctggttttgcaccagggctcttatttc
cgtgacttgtggaacatccttgactttattgtggttagtggcgcactggtggccttcgcc
ttcacggggagcagcaaaggaaaagatatcagcaccatcaagtctctgagggttctcaga
gtgctgcggccacttaagacgataaaacgtcttcccaaactcaaggctgtttttgactgc
gtagtgaactctctgaagaacgtcctcaacattctgatcgtctacctactcttcatgttc
atctttgctgtggtggctgtgcagctcttcaagggacgtttctttttttgcagcgatgaa
tccaaagagtttgagcgcgactgcagaggcgagtttttggtgtacgggcgcgataacgaa
gtgaaagcacagaaacgggagtggaagaagtacgaattccactacgacaacgtggcttgg
gccctgctcaccctcttcaccgtgtcaaccggagaggggtggccggacgtgctgaaacat
tcagtggacgcgacttatgagaatcagggccccagcccgggctatcggatggagatgtcc
atcttttacgtggtgtacttcgtggtcttcccctttttctttgtcaatatcttcgtggct
ctcattatcatcaccttccaggagcaaggggacaaaatgatggaggattacagtttagaa
aagaatgagagagcttgtatcgattttgccatcaacgccaagcctctgactcgccacatg
cccaagaacaagctcagctttcagtaccgcatgtgggagtttgtggtgtcgccaccattt
gagtacaccatcatggcgatgattgcgctcaacacaattgtccttatgatgaagtacgat
ggagcttcagatacctacgaagctgtgttagccaacctcaacatagtgtttacctcgctc
ttctccatggaatgtgtactcaagattattgcctttggagcactgaattattttaaagat
gcctggaacatttttgactgtgtgactgttctaggcagcatcactgacattctggttact
gaactcgggaataacttcatcaacctgagtttcctgaggctgttcagggcagctcgcctc
atcaagttgctgaggcaaggagaaacaattcgcatcttgctctggaccttcgttcagtcc
ttcaaggctctgccttatgtatgcctcctcattgccatgctcttcttcatctatgccatc
attgggatgcagctttttggcaatattgctattgaagaagacggagagggcgccatcgac
caacacaacaacttcagaaccttcgttcaggctctcatgctgctcttcaggagtgcaact
ggggaggcgtggcacgagatcatgctggcgtgtctcgggggcaaagagtgcgacgagctg
tcagggaacaccgagccggagtgtggcagccaagtggcttacctctactttgtctccttc
atcttcttctgttcatttttgatgctgaatctgtttgtggctgtcatcatggacaacttt
gagtacttgaccagggattcttctatacttggacctcaccacttggatgagtatgtcaga
atatgggcggagtatgatcctgctgcctgcgggcgcattcattataaggacatgtacagt
ttattacgagttatcgacccccctctcggcttaggcaagaaatgcccccatagggtggcc
tgcaagagactgctccgcatggatctgcccgtggccgacgacaacacggtccactttaac
tccaccctcatggctctgatccgcactgcgctggacatcaagattgccaagatttctgaa
ggtggtattgacaagcaccagatggacgcagaactgaggaaagagatgatggccatctgg
cccaatctctcccagaagcatctggacttgctggtcacgccccacaagtcagcgacagac
ctgacagttggcaaaatctacgctgccatgatgatcatggagtactaccgccagagcaag
atcaagcgctcgcaggcactccgggatgagcagcgcgtggaaccgccttccccgacccag
gacgggggtccgggccttaacagtgccctccctccacctgagacgacggagacaatgagc
agcctcccggtggaagtgggggtcccagagagccactcatgggtcacggctcgtgctcaa
gagatgtcccaaaaggtcggaagctggagcccagaagatggcctgggaagcatgaccacc
tcccagacggtagagatgagagagatggggcaggatggttactcggatactgagcacttt
ccaccaatggacggccacggcagggccgcttccatgccccgcctaccaggcgacaaccaa
aagcggaggaaggggaagcagcgtggcagtcacctcagtaccatcagtgacaacagcccc
atgaagcgctcggcctcgtcgttgggtcacagcaggtcaggacgcgccagccgagacaaa
gcgggcccaaatgcttacaacatggagcgcgtaatatctgaggaaggtcgggcctcccgg
cacgggcacaggaggaaagagcgcagtcaccgcgcctccgagaggtcactgtgtcgctac
acggaggctgacacagacacccagcagtcaggtgacctgatgtccaaggacagggatcgg
gacagagatcgtggcaggtccaaagaccgcaagcaccatcaccatcaccaccaccatcac
ggttccgcggacaaagaacgctacgccgccgagcgaggtggggagtacgtccgcaagcct
tctcgtgacagagaacccgacagggagagagagcgagagagggaccctcgctggtctcga
tcccccagcgagggccgcgactgcatgacgcacagacagggcagtagttcggtcagcgga
agccctgttccatcaacctccgggactagcacgccacgccgaggccgacgccagttgcct
cagacgcccgcgacgccccgcccccatgttacgtactcccctgtagtccgtaaagccgtg
cccccgcagcctgtggggcctcaggggcgggcaccggtcccagcgccccgacgattatct
cctgatgccccccaaggtcaggttcctcttgctggcatccctccagcccaccatgccgtg
ccccgccagggtcatcaccctccacttcgctgggcggacgcagacggaggagccatagaa
ggggacggctgcttttacaaccaaaactacatcccccaccatgaaccccccacccacgag
ccaggcggcaacccccatccgcacacgcaccccttgaccagccacccactgccacctcct
ccccaaccacagccacgcaacctgcacgccctccctccaccccagccgcaccctataaac
aacccccaccctcaccccttgccacaatacccgcagccaaaccgtacctcacctcggacc
gtccaccacgtgcccccttctggcgctccccttcaaagccaagtgcaagcccccgtccag
cgccgcctacccaacggttaccgctcttcgtcaccttccacacatctccacggaccccaa
cacagtgggcctcacaaggtcccacccccagggggacaccctagaggaccccgcaagggc
ctccacgaaccctattgcgagaaggagcaggacgactggtgctag
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integrated database retrieval system
