Shewanella bicestrii: CF168_13905
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Entry
CF168_13905 CDS
T05197
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00521
Streptomycin biosynthesis
sbj00523
Polyketide sugar unit biosynthesis
sbj00525
Acarbose and validamycin biosynthesis
sbj00541
O-Antigen nucleotide sugar biosynthesis
sbj01100
Metabolic pathways
sbj01110
Biosynthesis of secondary metabolites
sbj01250
Biosynthesis of nucleotide sugars
Module
sbj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CF168_13905 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CF168_13905 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CF168_13905 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CF168_13905 (rfbB)
00525 Acarbose and validamycin biosynthesis
CF168_13905 (rfbB)
Enzymes [BR:
sbj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CF168_13905 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ASK69859
UniProt:
A0A220UNX3
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Position
complement(3203715..3204734)
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AA seq
339 aa
AA seq
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MRILVTGGSGFIGSALVRLLIQATNCHVLNIDKLTYASHPDALIDISDDPRYQFVKADIC
DGARLDILFEQFKPNIVMHLAAETHVDRSIEGPAVFIQNNILGTFTLLEAARRYWTQLDS
SQKVQFRFHHVSTDEVFGSLADTGLFSETSAYDPSSPYSASKASADHLVRAWHRTYGLPI
VITNCSNNYGPFQYPEKLIPLMVNHALQGKSLPIYGNGQQVRDWLYVDDHVKALYLVATR
GQLGQTYNIGGGCERTNLAVVQQICLLLEELVPTHPQSLAMKGEGFAALIEHVVDRPGHD
IRYAIDASKIQHELGWQPLESFESGLRRAVEWMISQQAK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattttggttacaggtggttctgggtttatcggttcggctttggtgcgtctgctt
attcaagcgacaaactgtcatgtgctcaatattgataaattaacctatgctagtcacccc
gatgccttaattgatattagcgatgatccacgctaccaatttgtgaaggctgatatctgt
gatggtgcgagattagatatcctattcgagcaatttaagcccaacatagtgatgcatctt
gccgctgaaacccatgttgatcgttctattgaaggccctgcagtatttatccaaaacaat
attttggggactttcactctgttagaggcggctcgtcgctattggacacaactggatagt
tcgcaaaaagtacagtttcgcttccatcatgtttcaaccgatgaggtttttggctcgctc
gcagatactggattgtttagcgaaacttcagcttatgacccaagctctccttattcagcg
agcaaagcttcggcggatcacttagttcgtgcttggcatcgaacctatggtttaccgata
gtgatcactaactgctcgaataactatggtccgtttcaataccctgagaagctgatcccg
ttgatggttaatcatgccttacaaggcaaatcgttgcctatttatgggaatggccaacaa
gtgcgtgattggttgtatgtggatgaccatgtaaaagcgctctatttagtggctactcga
ggtcagcttggacaaacctacaatattggtggtggctgtgagcgaactaatctcgctgta
gttcagcaaatttgcttattacttgaggagttagtacctactcatccgcaatcacttgcg
atgaaaggagaaggttttgcagctttgattgagcatgttgttgatcgcccgggacacgat
attcgttatgcgattgatgcaagtaaaattcaacatgaattgggctggcaaccgctagag
tcgtttgaatcaggtcttagaagggcggtagagtggatgatttcacagcaagcgaaatag
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