Shewanella benthica: SHEWBE_1832
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Entry
SHEWBE_1832 CDS
T06707
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sbk
Shewanella benthica
Pathway
sbk00900
Terpenoid backbone biosynthesis
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SHEWBE_1832 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbk01006
]
SHEWBE_1832 (ispA)
Enzymes [BR:
sbk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SHEWBE_1832 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SHEWBE_1832 (ispA)
Prenyltransferases [BR:
sbk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SHEWBE_1832 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
SQH75798
UniProt:
A0A330M1H2
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All DBs
Position
SHEWBE:complement(1700724..1701605)
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AA seq
293 aa
AA seq
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MLVDTITRYQQRVDSQLEKIIDNQTVTDPKLLAAMKHGALLGGKRIRPFLVYAIGDMLSI
PLKQLDSSAAAIECVHAYSLIHDDLPAMDDDALRRGQPTVHVAFDEATAILAGDALQALA
FEVMCEPIDEIAPRQNLAMVRALAKASGYSGMCGGQAMDLSATNKPIDLATLSQLHKLKT
GALIRCAVELPMIAAQVSQEEQTLLMEFADAIGLAFQVQDDVLDIISSTEELGKPQGSDC
ESNKSTYPQLLGLAGAQATAKSLIEDALSALTKLPYNSQLIAEFARYIIERRV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagtcgatacgatcactcgataccagcaacgtgtcgatagccagctagaaaagatc
attgataatcaaactgtcacagatcctaaactccttgccgcgatgaagcacggcgcctta
ctcggtggcaaacgtatacgacctttcctagtttatgccatcggcgatatgctcagcata
ccactaaaacagctagattcatctgccgccgctatcgaatgtgtgcatgcgtattctctc
atccatgatgaccttcctgccatggatgatgatgcccttcgccgcggacagcctacggtt
catgtcgccttcgatgaggccactgcaattctggcaggcgatgcactgcaagccctagcc
ttcgaagtcatgtgtgagcccattgacgaaatagcgcctaggcaaaatttagccatggtt
cgcgccttagccaaggcttctggctattcgggtatgtgtggcggccaagccatggatctg
agtgccactaataaaccaatagacttagccacgcttagccaattgcacaaattaaaaacc
ggtgcgctaatacgctgcgccgtcgaactgcctatgattgcggcgcaagtatcccaggaa
gaacagactcttttgatggaatttgccgatgccataggtttagcattccaggtgcaggac
gatgtactggatattatctccagtacagaggagctcggaaaaccacaaggttctgattgc
gaatcaaacaaaagtacctaccctcaactactcggattagcaggcgcacaggccacagcc
aagagtttgattgaggatgctctatcagcgctgacaaaattaccttacaatagtcagcta
attgccgaattcgcccgttacatcatagagcgaagagtttaa
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