Shewanella benthica: SHEWBE_4177
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Entry
SHEWBE_4177 CDS
T06707
Name
(GenBank) putative Pyruvate dehydrogenase (NADP(+))
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
sbk
Shewanella benthica
Pathway
sbk00010
Glycolysis / Gluconeogenesis
sbk00020
Citrate cycle (TCA cycle)
sbk00620
Pyruvate metabolism
sbk00650
Butanoate metabolism
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
sbk01210
2-Oxocarboxylic acid metabolism
Module
sbk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SHEWBE_4177
00020 Citrate cycle (TCA cycle)
SHEWBE_4177
00620 Pyruvate metabolism
SHEWBE_4177
00650 Butanoate metabolism
SHEWBE_4177
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
SHEWBE_4177
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
Fer4_7
Fer4_6
Fer4
Fer4_9
Fer4_10
Fer4_15
TPP_enzyme_C
Fer4_2
Fer4_16
Fer4_8
Fer4_21
Transketolase_C
Fer4_4
Thioredoxin_2
Motif
Other DBs
NCBI-ProteinID:
SQH78137
UniProt:
A0A330MEA6
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All DBs
Position
SHEWBE:complement(4012025..4017037)
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AA seq
1670 aa
AA seq
DB search
MSLLEQKNNPKCNATQYPGLDTVIHGNGAVAHVMNHVCGGVIGYPITPSTEISEIYEEFR
AQGGCNVWDQHPFFFEPEGEHSAQSGALAAALTGGKYISNASSSQGILYALESHYVTVGK
KTAGFVLHVAARSVSRHSLNVMAGHDDVYALLSAGYTTLFASNAQEAADMAAISYKVSAQ
SLIPVANIMDGFATSHIQSKVQLPEPELLKQFLGNPSDRIPAPTEAQRLLYGAKGRVWQL
GLFIEQNQDQFWPEKLSALKEYLTSNSEKIETDSNGDLIEATKELVPTDLQSKWRRAWLN
AYEKDTRQRVPALVDTHNPGLTGGVQNQPDYQAGIVDHRTHFLSDVPQFIEQAMAEYGEL
SGRHYEPVMAFMCEDAEHVVIGLGSVTDDAEAVASYLRGQGKKVGVLSLKQLYPFPEAKL
IEKLAGKKSVTVLERCDETRLTESVSRSLMKARENADEVRHPGIMPLEKLPQLSTGIFGL
GGHDLQPSHLIAVFDNMYAKATKPFFYVGTTFFDDAATGELELIQNRLRQAYPGTELMAL
EVGENPNLLPDSAIRIRFHSVGGYGTIATGKLLTDILSGALGLHSKSMPKYGSEKSGAPT
NFFITLSPDPIKLTNAELQQVEVVLSPDHKVFMHTNPLSGLQKNGTFILQTHHTPEQVWQ
EIPQAARQYIRENNIHFYIIDAFEVARKHAPTPDLEIRMMGIAFIGALSGHADQVTGDTD
PQQMLERIEKQINKKFGAKGEKIVAGNMAVISDGIEATQAVNYANFSDDIAEAPKSSRSK
NQNQNQASCGLFDQSYFNNIAGEKYIDGTIGDAPVIPGSGMFIPPSSAITKDKGLFRLNV
PKFDPDVCTGCMECTIACPDGAIPNGVYELHDLLTYALNKLEIPPAQLEQAKSQIQPICD
GIRHHYRNLAKGESPSLPQIVATVVDKMDFTGPAVKHVAGLCVVLETIPMSFTKPFFDAM
ENDIPGTGGLFSLAVDPSKCTGCMECVDVCGPKALEKVRQTTELSSDIQQHFDTLAELPN
TPIRFLEQATQSAGEAKRLLLDRNNYYAMSPGHGACRGCGEVTALRLVISINRALQQQRY
KAHIVQLEELLEQLEAKKASLLADKAADKSDPQRLIRIEQTIALLDKRLYLFEQGPTGKG
PSDALIANATGCSSVYASTFPSNPYKDPWINSLFQDTPAIAKGLFEGEVVNQLAQIKAVR
SAKLDINDQYDPEVHDRQLRYLEWTGLSDNELALLPTVFSIGGDGATYDIGFGALSRLLT
TSTPVKVLVLNTGSYSNTGGQASTSSFTGQDSDLSRVGKEHSGKQEVRKELGIIASFHPK
VMVIQTSTALQGHFMSSLIEYINYQDAPALLDVYTPCMGEHGIADDASTRHSRLAVESRM
NPVFIHDPRKGETLAERFSLDGNPEGDQDWATQTITYVDSDGMTQLKQVPFTPADFALFE
GRFKKQFRAVSESDDVVEIAEYLKLSESERVGKTPVIWATDKKQHLIQLGIVDSLVALCE
ERLRNWKMLQYLSGQHMKQVELSYQQQLEQWRQRYDQAMEDKELAIDSIANGLAELAMTA
DTFSPENRIPVTQLDANSTAQASGNQPIVVINEDEQAECNDCKSCYQQVSELFEKTTIID
NGEAKVVAQVIPGAVDSVTLTDDLVRRAERIVDECDAEIIHFNAPATAGA
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtctttattggaacaaaaaaataaccccaagtgcaacgctacgcaatatcctggttta
gataccgtgattcacggaaacggtgcggttgcacacgtaatgaatcatgtgtgtggtggt
gtgattggctatcctattacgccatcgacagaaatatctgaaatctatgaagagtttcgt
gcacaaggcggctgcaacgtctgggatcaacaccccttcttcttcgagccagagggtgaa
cactctgcacaaagtggcgcattagccgccgccctaaccggtggtaagtacatctcaaat
gcctcatctagtcaaggtatcctatatgccctagagtctcactacgtcactgttggtaag
aagaccgctggatttgtgctgcatgttgcagcacgctctgtctctcgccactcactcaac
gtgatggccggccatgacgatgtctacgccctactttcagcaggatacaccacactattt
gctagcaacgctcaggaagcggccgatatggcagctatctcctataaagtgagcgcgcaa
tcattgatccctgtggccaatattatggatggcttcgccaccagccacattcaaagtaag
gtacaacttccagagcctgagctgcttaagcagttccttggtaatccaagtgatcgtatt
ccagcccccaccgaagctcagcgtctcctttatggagccaaggggcgcgtatggcaactg
ggtctctttattgagcagaaccaagatcaattctggcctgaaaagctatcagcactgaag
gaataccttacaagcaatagcgaaaaaattgagactgatagcaacggcgatctgattgaa
gccactaaagagttagttcccaccgacctgcaaagcaagtggcgccgcgcctggttaaat
gcctatgagaaagatactcgacagcgtgtaccagcactggttgatacccataacccaggt
ttaaccggtggcgtgcaaaatcagcctgattatcaagcgggtatcgtcgatcatcgcact
cactttctaagcgatgttccgcagtttatcgaacaagcaatggcagaatatggcgagcta
tctggtcgtcactatgagcctgttatggcgttcatgtgtgaagatgcagaacatgtagtc
atcgggctaggctctgtcaccgatgacgccgaagctgtcgccagttacctgcgcggccaa
ggtaaaaaagtgggcgtactgtcacttaagcagctctacccattcccagaagctaaatta
attgaaaaactcgcaggcaaaaagtctgtaaccgtgctggaaaggtgtgatgagactcgc
ttaactgaaagcgtgtcacgctcactgatgaaggcccgtgaaaatgccgatgaggttcgt
cacccaggtattatgccgcttgagaaactacctcagctcagcacaggtatcttcggtcta
ggtggccacgatcttcagccatctcaccttatcgctgtatttgataacatgtacgccaag
gcgactaagccgttcttctatgtgggtaccaccttcttcgatgacgctgcaactggtgag
ctagaacttatccaaaaccgcttacgtcaagcgtacccaggcactgagctaatggcactg
gaggtgggcgaaaatccaaatcttctccccgatagcgccatacgtatccgtttccactct
gtgggtggctacggtaccatagcaacgggtaaactgcttaccgatattctatctggcgca
ctgggcttacactctaagtcgatgcctaaatatggttcagagaagagtggtgcacccact
aacttctttatcacattgtcacccgatccaatcaagctgaccaacgccgagctccagcag
gttgaggtggtgttatcgcctgatcataaagtctttatgcataccaacccgctatctggt
ctgcaaaaaaatggtacctttattctgcaaacccaccataccccagagcaggtatggcag
gagatcccgcaggctgcccgtcaatatatccgtgagaacaacatccacttctacattatc
gacgccttcgaagtggcacgtaagcatgcaccgacacccgatctagagatccgtatgatg
ggtatcgcctttattggcgcactatcgggccatgccgatcaggtgactggcgataccgat
ccccagcagatgcttgagcgtatcgagaagcagattaacaagaagtttggcgccaagggc
gagaagattgttgccggcaatatggcggtgatcagcgatggcatcgaggcgactcaagcc
gttaactatgccaactttagcgatgatatcgccgaagcacctaaaagctcgcgtagtaag
aaccagaatcaaaatcaagccagctgtggtctgttcgaccagagctatttcaataatatc
gcgggtgaaaagtatatagacggcactatcggtgatgcgccagtgatccctggctctggt
atgtttatcccgccttcaagcgcaattaccaaagataagggactgttccgccttaacgta
cctaagtttgatccagatgtctgtaccggttgtatggaatgtaccatcgcctgtccagat
ggcgcaatcccgaacggagtgtacgagttacacgacctactgacctatgccctaaacaag
ctagagatcccaccagctcagctagagcaggctaaatctcagatccagcctatctgtgac
ggtatccgtcatcactaccgcaaccttgctaaaggcgagtcaccttcactgccacaaatc
gtagcaaccgttgtcgataagatggactttaccggtccagctgttaagcatgtcgccggc
ctgtgtgttgtgcttgaaacgattccaatgagtttcactaagccatttttcgatgcgatg
gaaaatgacattccaggtactggcggactatttagcctagcggtcgacccgagcaagtgt
actggctgtatggagtgtgtcgatgtttgtggccctaaggcacttgaaaaggtgcgccaa
accactgagcttagtagtgatattcaacaacatttcgataccttagccgagctacccaat
acgccgattcgcttccttgagcaagcaacccaaagtgcgggggaggccaagcgcctacta
ctcgatcgcaataactactacgccatgagcccaggccatggtgcctgtcgtggttgtggc
gaggtaaccgcacttcgcctagtcatttcgattaaccgcgcgctccagcagcagcgctac
aaggcacatatcgttcagctagaggagttacttgagcagctagaggctaagaaagccagc
cttcttgctgataaagctgccgataagagtgatccacagcgcttaatccgtatcgagcaa
actattgctctactagataagcgtctctacctatttgagcagggcccaacgggcaaaggt
ccatctgatgcactgatcgctaatgccacaggttgtagtagtgtttacgcatcgaccttc
ccatcgaacccttataaagatccttggatcaatagtctgttccaggatacgccagctatc
gctaaaggcttgtttgagggggaagtggtaaaccagcttgcacaaattaaagcggttcgt
agtgcaaaactcgatattaacgatcaatatgatcctgaagttcatgacaggcagcttcgc
taccttgagtggacaggtcttagcgacaacgagcttgccctacttccaacggtatttagt
attggtggtgacggtgcaacctacgatatcggcttcggcgcgttatctcgcttactgacc
acatcgaccccagttaaagtgctagtgcttaataccggtagctactcaaatacaggtggt
caggcttcgacctcaagcttcaccggacaggactcagatttgagccgtgttggaaaggag
cacagcggtaaacaagaggtgcgtaaagagctaggtattatcgccagcttccacccgaaa
gtgatggttattcaaacttctaccgcgctgcagggtcactttatgtcgagtctgatagag
tatatcaattatcaagatgcgcctgcactgcttgatgtatacaccccatgtatgggcgag
catggtatcgccgatgacgccagcacgcgccactctcgcctagcggttgagagtcgtatg
aacccagtatttatccatgacccacgtaagggagagaccttagccgagcgcttctctctg
gatggaaaccctgagggagatcaagactgggcgacacagaccatcacctatgtcgacagc
gacggtatgacgcagcttaagcaggtgccattcacaccagccgactttgccctatttgag
ggacgcttcaagaagcagttcagagcggtgagtgagagtgatgatgttgttgagatcgct
gagtatcttaagctcagtgaatcagagcgtgtgggtaaaactccagtgatctgggcaact
gataagaagcaacaccttatccagctaggcatagtcgactctcttgtcgccctttgtgaa
gagcgcctgcgtaattggaagatgctccagtacctaagtggccagcatatgaagcaggtt
gagcttagctaccagcagcaactcgagcagtggcgtcaacgctacgaccaagcgatggaa
gataaagagttagccatcgacagtatcgccaatggtctggctgagctggctatgacagct
gatactttttcaccagaaaaccgcattccagtgactcagctcgatgccaatagcacagct
caagcaagtggtaaccagcctatcgttgtgatcaacgaagatgaacaagccgagtgtaac
gattgtaaatcttgctaccagcaagtgagtgagctgtttgagaaaaccaccattatcgat
aacggcgaagccaaagtggttgctcaggtgatcccaggtgccgtcgacagtgtcacctta
actgatgaccttgttcgccgcgccgagcgtatcgtcgatgagtgtgacgccgagatcatc
cactttaacgcaccagcaactgcgggagcctag
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