Shigella boydii Sb227 (serotype 4): SBO_0315
Help
Entry
SBO_0315 CDS
T00301
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00900
Terpenoid backbone biosynthesis
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
Module
sbo_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SBO_0315 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbo01006
]
SBO_0315 (ispA)
Enzymes [BR:
sbo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SBO_0315 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SBO_0315 (ispA)
Prenyltransferases [BR:
sbo01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SBO_0315 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Arm-DNA-bind_3
UbiA
Motif
Other DBs
NCBI-ProteinID:
ABB65028
ShiBASE_China:
SBO0315
UniProt:
Q325I0
LinkDB
All DBs
Position
complement(329048..329947)
Genome browser
AA seq
299 aa
AA seq
DB search
MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFG
VSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRH
KTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSPDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttccgcagcaactcgaagcctgcgttaagcaggccaaccaggcgctgagccgt
tttatcgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggtgca
ttattaggtggtaagcgtctgcgacccttcctggtttatgccaccggtcatatgtttggc
gttagcacaaacacgctggacgcacccgctgccgccgtagagtgtatccacgcttactca
ttaattcatgatgatttaccggcgatggatgatgacgatctgcgtcgcggtttgccgacc
tgccatgtgaagtttggcgaagcaaacgcgattctcgctggcgacgctttacaaacgctg
gcgttctcgattttaagcgatgctgatatgccggaagtgtcggatcgcgacagaatttcg
atgatttctgaactggcgagcgccagcggtattgccggaatgtgcggtggtcaggcatta
gatttagacgcggaaggcaaacacgtacctctggacgcgcttgagcgtattcatcgtcat
aaaaccggcgcattgattcgcgccgccgttcgccttggtgcattaagcgccggagataaa
gggcgtcgtgctctgccagtactcgacaagtacgcagagagcatcggccttgccttccag
gttcaggatgacatcctggatgtggtaggagatactgcaacgttgggaaaacgccagggt
gccgaccagcaacttggtaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aagaaagcccgggatctgatcgacgatgcccgtcagtcgctgaaacaactggctgaacag
tcacccgatacctcggcactggaagcgctagcggactacatcatccagcgtaataaataa
DBGET
integrated database retrieval system