Shigella boydii Sb227 (serotype 4): SBO_1906
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Entry
SBO_1906 CDS
T00301
Symbol
ycfB
Name
(GenBank) conserved hypothetical protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SBO_1906 (ycfB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbo03016
]
SBO_1906 (ycfB)
Enzymes [BR:
sbo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SBO_1906 (ycfB)
Transfer RNA biogenesis [BR:
sbo03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SBO_1906 (ycfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABB66499
ShiBASE_China:
SBO1906
UniProt:
Q31ZK9
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All DBs
Position
1885842..1886993
Genome browser
AA seq
383 aa
AA seq
DB search
MIEYAALKFNVVSDPMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG
EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE
IKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ
SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQPGKIITVD
GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV
GLIAQQLHWVDREPFTGTMRCSVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQS
AVFYNGEVCLGGGIIEQRLPLPV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaatacgccgccttgaagttcaatgtcgtgagtgatccaatgtctgaaaccgca
aaaaaagtaatcgtcggcatgtccggcggtgtcgattcctccgtttctgcctggctgttg
caacaacagggatatcaggttgaaggcctgtttatgaagaactgggaagaagacgacggt
gaggaatattgcacagcggcagcggatctggctgatgcccaagctgtctgcgacaagctc
ggcattgaactgcacaccgttaactttgctgccgagtactgggacaacgtcttcgaactg
ttccttgccgaatataaagccggtcgcacgccgaatccggatattctgtgcaacaaagag
atcaaatttaaagctttcctcgaatttgccgccgaagatttaggtgccgattatatcgct
accggtcattacgtacgtcgggccgatgtcgatggcaagagccgcctgctgcgtggtctg
gacagcaataaagaccagagctacttcctttatacgctcagccatgagcagattgcgcaa
agcctgttcccggtcggcgaactggaaaaaccgcaggtgcgtaagattgctgaagatctt
ggtctggtcaccgcgaagaaaaaagactctaccggcatttgcttcattggcgaacgtaaa
ttccgcgagttcctgggccgttatctcccggcgcaaccgggcaaaatcattaccgtcgat
ggcgatgaaattggtgagcaccaggggctgatgtatcacactctcggtcagcgtaaaggt
ctgggtatcggtggcaccaaagaaggcaccgaagaaccgtggtatgtggtggacaaagac
gtcgaaaacaacattctggttgttgcgcagggccatgaacacccgcggctgatgtctgtc
gggttgattgcccagcagttgcactgggtcgatcgcgaaccattcaccggtactatgcgt
tgctcggtaaaaacccgctatcgccagaccgatatcccttgcaccgtcaaggcgctggac
gatgatcgcattgaagtgattttcgatgaaccggttgccgccgtgacgccgggccagtct
gccgtcttctataacggtgaagtgtgcctcggtggcggtattattgagcagcgtctgccg
ctgccggtctga
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