Shigella boydii Sb227 (serotype 4): SBO_2774
Help
Entry
SBO_2774 CDS
T00301
Symbol
ygbB
Name
(GenBank) conserved hypothetical protein
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00900
Terpenoid backbone biosynthesis
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
Module
sbo_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SBO_2774 (ygbB)
Enzymes [BR:
sbo01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SBO_2774 (ygbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
ABB67300
ShiBASE_China:
SBO2774
UniProt:
Q31XA8
LinkDB
All DBs
Position
2781499..2781978
Genome browser
AA seq
159 aa
AA seq
DB search
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattggacacggttttgacgtacatgcctttggcggtgaaggcccaattatcatt
ggtggcgtacgcattccttacgaaaaaggattgctggcgcattctgatggcgacgtggcg
ctccatgcgttgaccgatgcattgcttggcgcggcggcgctgggggatatcggcaagctg
ttcccggataccgatccggcatttaaaggtgccgacagccgcgagctgctacgcgaagcc
tggcgtcgtattcaggcgaagggttataccctgggcaacgtcgatgtcactatcatcgct
caggcaccgaagatgttgccgcacattccacaaatgcgcgtgtttattgccgaagatctc
ggctgccatatggatgatgttaacgtgaaagccactactacggaaaaacttggatttacc
ggacgtggggaagggattgcctgtgaagcggtggcgctactcattaaggcaacaaaatga
DBGET
integrated database retrieval system