Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101031035
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Entry
101031035 CDS
T04350
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04151
PI3K-Akt signaling pathway
sbq04510
Focal adhesion
sbq04512
ECM-receptor interaction
sbq04820
Cytoskeleton in muscle cells
sbq04974
Protein digestion and absorption
sbq05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101031035 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101031035 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101031035 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101031035 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101031035 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101031035 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sbq00535
]
101031035 (COL9A1)
Proteoglycans [BR:
sbq00535
]
Extracellular matrix (ECM) proteoglycans
Others
101031035 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
101031035
NCBI-ProteinID:
XP_003926391
UniProt:
A0A2K6U1J4
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MKTCWKIPVFFFVCSFLEPWASAAVKRRPRYPVNSSSNGGHELCPKIRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTTLQVAYKLGNNADFRIPTRNLYPSGLPEEYSFLTTFRMT
GSTLKKNWSIWQIQDSSGKEQVGVKINGQTQSVAFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGPIDIDGSAVLGKLADNPQVSVPFELQWMLI
HCDPQRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPGRGIP
GPPGPPGTTGLPGELGRVGPVGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDK
GEKGARGLDGEPGPQGIPGAPGDQGQRGPPGEAGPKGDRGAQGVRGIPGLPGPKGDTGLA
GVDGHDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQM
GNSGKPGQQGPPGEAGPRGPRGLPGSRGEMGPVGSPGLPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGIVGEPGPKGEQGASGEEGEAGERGELGDIGLPGPKGSAGNPGEPGLRGPEGSR
GLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDHHIKQVCMRVIQEHFAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGPMGMRGLPGVKGPPGALGLRGPKGDLGEK
GEPGPPGRGPKGLPGAIGLPGDPGPASYGRNGQDGERGPPGVAGIPGVPGPPGPPGLPGF
CEPASCTMQAGQRAFIKGPDQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctgctggaaaattccagttttcttctttgtgtgcagtttcctggaaccctgg
gcatctgcagctgtcaagcgtcgccccagataccctgtcaattccagttctaatggtgga
catgaactctgtccaaagatcaggattggccaagatgacttaccagggtttgatctgatc
tctcagttccaggtagataaagcagcatctaggagagctatccagagagtagtgggatca
actacattacaggtggcttacaaattgggaaacaatgcagacttcaggattccaactagg
aatttatatcccagtgggctgcctgaagaatattccttcttgacaacatttcggatgact
ggaagcacactcaaaaagaactggagcatttggcagattcaggattcctctggcaaggag
caagttggcgtaaagattaacggccaaacacaatctgttgcattttcatacaagggactt
gatggaagtctccaaacggcagccttttcaaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggagaggagtagtgctactctttttgttgactgcaacagg
attgaatctttacctataaagccaagaggcccaattgacattgacggctctgctgtgctg
ggtaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctgatc
cattgtgacccccagcggcctaggagagaaacttgccatgagctgccagccagaataacg
cccagccagaccactgacgagagaggtcccccgggcgagcagggtcctcccgggcctccg
ggcccccctggagttcccggcatcgatggcatcgacggtgaccgaggtcctaagggtccc
ccaggcccaccgggtcctgcaggcgaaccgggaaagccaggagctccaggcaagcccggc
acacccggcgctgatggattaacaggacctgatggatcccctggctctgttggaccaaag
ggacaaaaaggagaacctggtgtgcctggctctcgtggatttccgggccgtggtattcct
ggaccccctggtcctcctgggacaacaggtctccctggagagcttggccgtgtaggacct
gttggtgaccctgggagaagaggaccacctggaccccctggacctccaggacccagtgga
acaattggctttcatgatggagatccattgtgtccgaattcctgtccaccaggtcgctca
ggatatccaggcctaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
ccaggaagacaagggcacaagggtgaagaaggtgaccagggagaactgggagaagttgga
gctcaaggacctccaggagcccagggtttgcgaggcatcactggcatagttggggacaaa
ggggaaaaaggtgctcggggcttagatggtgaacctgggcctcagggtattcctggtgca
cctggtgatcaaggacagcgaggacctccaggagaagcaggtcccaaaggagatagggga
gctcaaggtgttagaggaattcctggtctccctgggcccaaaggagacacgggcttggca
ggtgtggatggccatgatgggatccctggaatgcctggaacaaagggtgaaccaggaaaa
cctgggcctcctggtgatgcaggattgcaggggttaccaggtgtacctggaattcctggt
gcaaagggtgttgctggtgaaaagggtagcacaggtgctccagggaagcctggtcagatg
ggaaattcaggcaagccgggccaacaagggcctccaggagaggcaggaccccgaggaccc
cggggacttcctggcagtagaggagaaatgggtccagtgggatccccaggcctaccaggt
aaactgggttctctgggtagccctggcctccctggtttgcctgggccccctggacttcct
ggaatgaaaggtgacaggggaatagtcggtgaaccaggtccaaaaggtgaacagggtgcc
tctggtgaagaaggtgaagcaggagaaaggggagaacttggagatataggattacctggc
ccaaagggatctgcaggtaatcctggggaacctggcttgagagggcctgaaggaagtcgg
gggcttcctggagtggaaggaccaagaggaccccctggaccccggggtgtgcagggagaa
cagggtgccactggccttcctggtgtccagggccctccgggtagagcaccgacagatcat
cacattaagcaggtttgcatgagagtcatacaagagcattttgctgagatggctgctagt
ctcaagcgtccagactcaggtgcctcggggcttcctggaaggccgggccctcctggccct
ccgggccctcctggagagaatggtttcccaggcccgatgggaatgcgtggccttcccggc
gttaaagggcccccaggtgctcttggtttgaggggacctaaaggtgacttgggagaaaag
ggggagcctggccctccaggaagaggccccaaaggtttgcctggagctataggtctccca
ggtgacccaggccctgccagctatggaagaaatggccaggatggtgagcgaggccccccg
ggggtggcaggaattcctggcgtgcctggacccccaggacctcctgggcttcctggtttc
tgtgagccagcctcctgcaccatgcaggctggtcagcgggcatttatcaaagggcctgac
cagtga
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