KEGG   Shewanella carassii: TUM17387_03260
Entry
TUM17387_03260    CDS       T07543                                 
Name
(GenBank) hypothetical protein
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
scaa  Shewanella carassii
Brite
KEGG Orthology (KO) [BR:scaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scaa03400]
    TUM17387_03260
Enzymes [BR:scaa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TUM17387_03260
DNA repair and recombination proteins [BR:scaa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TUM17387_03260
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Zn_ribbon_Top1 UvrD_C_2 AAA_12 AAA_30 Zn_ribbon_recom AAA_11 Phage_endo_I
Other DBs
NCBI-ProteinID: BCV64967
LinkDB
Position
complement(355320..358331)
AA seq 1003 aa
MSSKQSEQSIKHSWFGHFYMGKPDAVKLTSCGITFHRGKGLFAPEHPVINNTSDEVSFKW
QQLDSPPTFNFSPLGYLLSFTVSGEVYQLPYLTYWARYQSSKEVTQRWAAGNGQSICELV
ARVERTLATEYLRQSRLEMIQARVKREYKRWFPWSENMQLDNDITAALTKLKLMHCWSPT
DIERLRENYVQAQLIKFADFFEHVESNPLTDKQRRACIIDDNNNLLLAGAGTGKTSVMVG
RAGYLVKSGQAQADDILLLAYGRKAADEMDERIKEKLGTDDIKTSTFHSLGLRIISEVEG
ASPSLSPWAEDEKSKDRWVQSTLETLIENEAYRKQLFEYFSQCYYVEKSPFDFESKGEYF
QYLIDNDIRTLKGERVKSFGELYIANWLFSNGIEYQYEAKYEHDVSSVDFRQYQPDFYLP
DYCVYIEYYGTDEDDSTAPYIDNQQYLESMEWKRQLHKKHETVCLELFYHQHRKGLLIEK
LEHAIQALKIKESPLPDEAILATLNELGRVTELAKLFSKLIGLYKAACLDNNGLEKVFNN
AADAKQTRKAFELLEPILSRYQQHLSASGDIDFEDMIAKALGYLQHGQFISPWRYIMVDE
FQDISEPRARLVKALRDSSLPGSKSKASLFCVGDDWQAIYRFNGADVNLTTQFTDYFGPT
TKTYLDQTFRFNSSIGDVATQFVTKNPVQLKKDIRSLSQVDYPTVSLIRRGEQEPATKDE
PSPNALEQALKAINMRANKAEDKLKSKPVVYLLARFWFQLPDKSELRQLNRKYPSLTIEC
QSFHASKGKEADYVVITGMKTGKHGFPSTKVTPPILDAFLPKAESFEFAEERRLFYVALT
RAKHRAYVLADMTDASPFVVELLKENYAVEQEEFSTSLVQKIFEEISCVRCTTGTLKPRV
GKFKPFFSCSHFPLCDHKEEGCELCGSPMTRKRFTGFKVCLNDTCSHTAPVCSVCGGDMK
LRKGPYGEFWGCINYRRDIPTSCSNKINKQVAISLLEQSKRDH
NT seq 3012 nt   +upstreamnt  +downstreamnt
ttgtcatcaaagcaatctgaacaaagcattaaacacagttggtttggccatttctatatg
ggcaagcctgatgctgtaaaactcactagctgtggtattacttttcatcgtggtaaaggt
ttgtttgcgccagaacaccccgtaatcaataacacgagtgatgaagtgagttttaagtgg
cagcaacttgactcgccaccaacatttaactttagtcctttgggttacctacttagcttt
accgtatccggtgaggtttatcaattgccctacttaacctactgggctcgttatcaatct
agtaaagaagtgacacaacggtgggctgctggtaatgggcaaagtatctgtgagctggtg
gctcgagttgagcgcacccttgctactgagtacctgcgccaatcacgcttagagatgata
caggccagagttaagcgtgagtataaacgctggttcccttggtctgaaaatatgcaattg
gataatgatataacagcagcactaaccaagttaaagctgatgcattgctggagcccaacc
gatatagaaaggttacgtgaaaactatgttcaagcacagctgatcaagtttgccgatttc
tttgagcatgttgaatctaaccctctgaccgataagcagcgacgagcctgcatcattgat
gataacaataacttgttattagcgggtgctgggacaggaaagaccagcgttatggtgggt
cgtgctggctacttagttaaaagtggtcaagcacaagccgatgatattttgctgctcgcc
tatggcagaaaagccgctgacgagatggatgaacggataaaagagaagcttggtacagat
gatattaaaacgagcacttttcatagcttaggtttaaggattatttctgaagttgaaggc
gcatcacccagtctgtctccttgggctgaggatgaaaaatccaaagataggtgggtacag
agcacccttgaaactttgattgaaaatgaggcctatcgtaaacagctgtttgagtacttt
agccaatgctattatgttgagaaaagccctttcgattttgagtcaaagggtgagtatttc
cagtacttaattgataacgatattcgcaccttgaaaggggagcgagtaaaaagcttcggc
gagctttatatcgctaattggctattcagtaatggcattgagtaccagtatgaagctaaa
tatgagcatgatgtaagtagtgttgatttccgccaatatcagcctgacttctacctacct
gactattgtgtctatattgagtattacggcactgatgaagatgatagcaccgcgccttac
attgataaccagcaatatttggagtcaatggagtggaagcgccagctgcacaaaaagcat
gaaacagtctgtcttgaactgttttaccatcagcatagaaaaggcctgctcattgaaaag
ctcgaacacgccatccaagcattaaaaatcaaagagtcccctctacccgatgaagcgata
ctcgcaacccttaatgaacttggtcgcgttaccgagttagctaagcttttcagtaagcta
attggcttgtataaagctgcttgcttggataacaacgggctagagaaggtatttaataat
gccgcagatgccaagcaaactcgtaaagcatttgagctgctagagccgatactaagcagg
taccaacaacacctgtcagcttctggcgatatagattttgaggatatgatagccaaagca
ctcggctatcttcaacatgggcaatttattagtccatggcgctatattatggtggatgag
tttcaagatatctcagagcccagagcgcggttagttaaagccttaagggattcaagctta
cctggcagtaaatcaaaagcatctctattttgtgttggtgatgactggcaagcgatttat
cgctttaatggtgcagatgtcaacttaaccacacagtttacagattatttcggtccaact
actaaaacgtacttagatcagacattcaggttcaacagcagcattggtgatgttgcaaca
cagtttgtgactaagaaccctgtgcagctaaagaaagatattcgctctctatcgcaagtc
gattaccccacggtttcattgatacgacggggtgagcaagagccagcaactaaagatgaa
ccaagccctaatgcacttgagcaggctttaaaagctattaacatgcgtgctaataaggct
gaagataaactaaagagcaagcctgttgtgtacctgctcgctcgtttctggtttcaacta
ccggataagagtgagctaagacagctgaatcggaagtatccaagtttaactattgagtgt
cagtcttttcatgcctcaaaaggtaaagaggcggattatgtggtgatcacggggatgaaa
acgggaaagcatggcttcccctcaacgaaagtcaccccaccaatacttgatgcattttta
cctaaagcagagtcatttgagtttgcagaagagcgtcgcctattttacgttgccttaact
cgtgcaaaacaccgcgcctatgtacttgccgatatgacagatgctagcccgtttgtagtc
gaactactcaaggaaaactatgctgttgagcaagaggagttcagcacctcactagtgcaa
aagatctttgaagagataagttgtgtacgttgcaccactggtacgcttaaaccaagagtc
ggcaagttcaaacccttcttctcatgctcacactttcccttatgtgatcataaagaggag
ggctgtgagctttgtggtagtcccatgacacgtaaacgctttactggctttaaagtatgt
cttaatgacacttgtagccacactgcacctgtttgcagcgtctgtggtggagatatgaaa
ttaagaaaaggtccctacggtgagttctggggctgtatcaactacagaagagatatcccc
actagctgcagtaataaaattaataaacaagtggcgattagcctgttggagcaatctaag
agggaccattag

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