Shewanella carassii: TUM17387_08430
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Entry
TUM17387_08430 CDS
T07543
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scaa03036
]
TUM17387_08430 (xerD)
Chromosome and associated proteins [BR:
scaa03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
TUM17387_08430 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BCV65484
LinkDB
All DBs
Position
941962..942876
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AA seq
304 aa
AA seq
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MAATSSSAYVQDPLIEGFLDDLWSSKGLSDNTLAAYRNDLRHFDQYLQGRGLTLSAAGRD
AVQDYLGFRFGKGVAESSSARLKSSLRRFYGFLLRRQLITEDPMARIASTKLKRKLPGSL
SEAEVDALLAEPIREDPIEARDKAMLELLYATGLRVTELVGLTLEQVSLRQGLVRITGKG
GKERLVPMGEVAVSEIESFLKLARTELLGGKQSDVVFPSKRAQMMTRQTFWHRIKLYALR
AGISTELSPHTLRHAFATHLLNHGADLRVVQLLLGHSSLSTTQIYTHVANARLQSLHQQH
HPRG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgacttcttcatccgcttatgtccaggatcctttgattgaaggttttctcgat
gacctctggtccagtaagggcctgagcgacaacaccctggcggcctatcgcaatgacctg
cgccattttgatcagtatctgcagggaagagggctgacgctcagtgccgccgggcgcgat
gcggtgcaggattatctcggttttcgattcggcaaaggcgttgccgagagtagcagtgcc
aggttgaagagcagcttgcggcgcttttacggttttttgctgcgtcggcaactgataacg
gaagatcccatggcgcgtatcgcctccaccaagctcaagcgcaaactgcccggtagtctc
agcgaggccgaggtggatgccttgctggctgagcccatacgggaagacccaatcgaagcc
cgagacaaggcgatgctggagctgctatacgccaccgggctcagggtcactgaactggta
gggttgacgctggagcaggtgagtctgcgtcaggggctggtacggatcacgggtaaaggc
ggcaaggagcgcttggtgcccatgggtgaggtggccgtcagcgaaatagagtctttcctc
aagctggcacgcaccgaactgctcggcggtaaacagagtgatgtggtgtttccctccaag
cgtgcccagatgatgacccgccagaccttctggcacaggatcaagctctatgccctgcgg
gccggtatcagcaccgagttgtcgccccataccctgagacacgcctttgccacccatttg
ctcaaccatggcgccgacttgcgggtagtgcagttgttgctggggcacagctcgctgtct
accacccaaatctatacccatgtggccaatgccaggttgcagtcgctgcatcaacagcat
catccaagaggttga
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