Stomoxys calcitrans (stable fly): 106092167
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Entry
106092167 CDS
T07664
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106092167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106092167
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106092167
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_4
CODH_A_N
Motif
Other DBs
NCBI-GeneID:
106092167
NCBI-ProteinID:
XP_013114394
UniProt:
A0A1I8NNT7
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Position
2:complement(6447194..6452553)
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AA seq
614 aa
AA seq
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MESSESAQDTGSREAQDLITKASDEFDIGNYDECINILQQLEKLKGRDCKSHHNQAVAKF
YKGKCKDYWGLLKTLEELDVNESSRNIPTISALSPVPLYNKAVIYYHRHMYQTAMDTISP
ITEKIETYDANAIAMIGILMLRLLLATNQPQKAYRFLETILGHLGINIATLATDECNVQE
TVPRLEEKTNKHLKLLSLLTHVVNRKIVVVPEDGSPEFAALKAHQYYIMKDFQMAAKQLK
KINVDSYMGGIYNHELNTLIANNMGVIHLRVRHYAIAANFFQNAINFDKHIASNLRNAEL
HDMSSAKSCEILYNLGIAMLHLRRPKEAFQCFLMPLKTYHSNPRLWFRIAEACIMEYEMK
RSNDEKLKANSATRSLFSNRIDYSESSQSAAVPEPTMPFAALSLRNALTFTRFYMSQLHT
SSSSDESAEGIENQESNWQRTRDNNFCNPSGPVTKESFDTMLSSIYAAHSYVCLRLGDYV
TALEMAEELLKMENLSDAHKMLAHMYAGEAFIMMDNLSEARPHLEPTFVSNLNTFDFETK
DWQVKSLDAAQNVVRYNLAVAMTLQGDLEMARSLLNTCTHPIVAQKVFNLKKTQGAIMAA
ALQKQQQTTTPRIT
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttcggagtcagcacaggatactgggagccgtgaagcccaagacttaataaca
aaagccagtgatgaatttgacataggaaattatgatgagtgcatcaatatcttacaacaa
ctggaaaaattaaagggtcgtgattgtaagtcacatcacaatcaggccgtggccaaattc
tataagggaaaatgtaaagattactggggcttgttgaaaacattggaagaattagacgtg
aatgagagcagtcgcaatatacccacgatttcagcattatcgccagtgccgctgtacaat
aaagcagtgatttattatcatcggcatatgtatcaaacagccatggataccatcagccca
attacggagaagatagagacgtacgacgccaatgcaatagcaatgatagggattttaatg
ctgaggttgttgctggcaacaaatcaaccacagaaagcatatcgctttctcgaaactatt
cttggacatttgggtataaatattgcaacattagccacggatgaatgtaatgttcaggag
actgtacctagacttgaagagaaaacgaataaacacttaaaacttttgtcattactgaca
catgtggtcaatagaaagattgttgtggtgccagaggatggatctccagaatttgctgcg
cttaaagcacatcaatattatataatgaaggacttccaaatggccgctaaacaattaaag
aagataaatgtggattcgtatatgggaggtatttacaaccacgaactgaacacacttatt
gccaataatatgggcgtaattcatttgcgagtacgacactatgctatagcagcaaatttc
ttccagaatgccattaactttgataaacacatcgcctcaaatctacgcaatgccgagttg
catgacatgagttctgctaaatcatgcgaaattctctataatttgggcatagccatgtta
cacttgagaagaccaaaggaagcgtttcaatgttttttgatgcctttgaaaacctaccac
agtaatccccgtctatggttcagaatcgccgaggcttgtataatggagtatgaaatgaaa
agatcgaatgatgaaaaactcaaagccaattccgctacaagatcattgttttccaacaga
atagactactctgagagcagtcaatcggcggcagtgcccgaacccacaatgcctttcgct
gcgttgagtttgcgcaatgctttaacgtttacacgattttatatgagccaattacacact
tcatcctcgtctgatgagtcagctgagggtattgaaaaccaagagtctaattggcaacga
actagggacaataatttttgtaatccctctggtccggttaccaaggaatcatttgatacg
atgctatcttccatatatgcggcacacagttatgtctgtttgagattaggtgattatgta
acagcattggagatggcagaggaattactaaaaatggagaatctatccgatgcacataaa
atgctagcacacatgtatgccggcgaagcatttataatgatggacaatttgtcagaagcc
cggccccatttagaacccacatttgtttcgaatcttaatacatttgatttcgaaactaag
gattggcaggtgaaatcattggatgctgctcaaaacgtagtacgctataaccttgctgta
gccatgacattgcaaggcgaccttgaaatggcacgtagccttctcaatacctgcacacat
ccgatagtggcgcaaaaagtatttaatctaaaaaagactcagggtgcgataatggcagct
gctttgcaaaaacaacagcaaacaacaacacctaggattacatga
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