Stomoxys calcitrans (stable fly): 106093612 Help Entry 106093612         CDS       T07664                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism scac  Stomoxys calcitrans (stable fly) Pathway scac03008   Ribosome biogenesis in eukaryotes scac03018   RNA degradation Brite KEGG Orthology (KO) [BR:scac00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     106093612   09123 Folding, sorting and degradation    03018 RNA degradation     106093612  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:scac03019]     106093612    03009 Ribosome biogenesis [BR:scac03009]     106093612    03016 Transfer RNA biogenesis [BR:scac03016]     106093612    03036 Chromosome and associated proteins [BR:scac03036]     106093612 Messenger RNA biogenesis [BR:scac03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      106093612   mRNA degradation factors    5'-3' decay     5' exonucleases      106093612 Ribosome biogenesis [BR:scac03009]  Eukaryotic type   Pre-60S particles    RNases     106093612 Transfer RNA biogenesis [BR:scac03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     106093612 Chromosome and associated proteins [BR:scac03036]  Eukaryotic type   Gene silencing    piRNA pathway     106093612 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Motif Other DBs NCBI-GeneID:  106093612 NCBI-ProteinID:  XP_013116160 UniProt:  A0A1I8P3W4 LinkDB All DBs Position 4:70991893..71018369 Genome browser AA seq 1472 aa AA seqDB search MGVPKFFRYISERYPCLSELAREQCVPDFDNLYLDMNGIIHNCSHPDDTNIHFNITEEDM FKDIFNYIDKLFFLIKPQKLFFMAIDGVAPRAKMNQQRSRRFRSAKEAETLERLALSRGE VREHERFDSNCITPGTEFMERLHEALRYFIKSKISADPMWQKCRVILSGHNAPGEGEHKI MDYIRYLKSQNDFDPNTRHCLYGLDADLIILGLCTHELHFVVLREEVKFGRKNKKASVEE TRFFLLHLRLLREYLELEFDELKQYPSFDIAKLIDDWVLMGFLVGNDFIPHLPFLNISSN ALPLLYKTYKKVYPELRGNINENGSLNLERLEKYFEALSEVEFENFQENYADLKYFNTKQ NGVDEAFDFDVSEINAEKVDDDLAALIESSKQFLDDEEDLSDEEGQHITDEFENFKRNYY MNKLNQENSDSAYKKEQAICYITALQWILDYYYRGVRSWGWYYPHHYAPFISDLKNFKDH VIKFDMGKPFLPFQQLLAVLPAASKALLPTAYRDLMTSPQSELIDFYPEDFETDLNGKMN EWEAVVLIPFIDEKLLLQAMEPCDQNLSPDEYKRNQHGPMLQYDYNPESQGQSPGIYSLK ALYHVYCTEKPFWSRDIMVPADRTVCKELPNAARSVFFPGFPTMKHLDYKFELRCARVKV FDYPARNENMILQPMARKNLDDVFAVAEQMLNQTVYIGWPHLIKAKVVGISNKEKYIDTD GIKDMEPKIYDLHLRAVQEHLMTRMGIEFADLSVLVHVRTYVGSSYICGSQGKVSLSEMW STTTTAYPAQGVVSQIAVQNTLTNQVKKIEQLFPENSRIFFVGNPYYGSEGVVMNPMLVY ECGRLKVNITVLPEPNFAEAKYIQNQLENEYIPSHQAAVQIGIQIKCLARLTGSVLVVKG ARRPKSDLPNNLAKINIGLQFKYFKSNEELVGYTRRIHNQWFMSSKAIALVQSYVEKFPL IIEYLSTSNDRSDLLFEQDIFPNDVGEGKLEAIAAWLKDQPHSKAEKIACGSKTMEKEAV EKVLEAMEELKTLPVKTVKLQVKPHLLLKPDVSLPSIYKPKRSIKLFDRVVVVKTTYMVP LGSKGTVIGVYPVSDPNPVRLECVRAVENFYEVLFDKTLPNGNDVHGIAEQRVYKVPESS VLLIFTQGNNNEQFYEAKLQLEESRNDSVKLKSQSVGNNTNTTTVVSNETKVPQIVQKGS NDFWMPSLNTKIKHSGNGGMTNRTTSSSGVANTATQEAQTNQLKILQNPLHLNQINDSVV TGTAECQEFQDGTHALKSLLGIVPSQSPLYQTQTSPNVSKAQLPKPPTSWRADAQKFPLP QTYPQLPLHQPPFSQGNAPVAVIGGNVIPLPTPTCKDQNPPQFVFNSNSLNQKGAFIPLQ VARGNSQTSEAPVPGTALTINNSNIVSSVTASCATNVLTQNLSQLAVSTGGNEVNVSSGH PGATVTSVEKTAYGRKKPPRVPKIGAKFDVAY NT seq 4419 nt NT seq  +upstreamnt  +downstreamnt atgggtgtaccgaaattcttccgatacattagtgaaaggtatccttgccttagtgaattg gcacgggaacaatgtgttcccgatttcgataatttatacttggatatgaatggaattata cacaactgttcacatccagatgacaccaacattcatttcaacatcaccgaagaggatatg tttaaggatatttttaactacattgacaagttatttttcttaatcaaaccacaaaaatta ttcttcatggctatagatggcgtggcacctcgtgccaaaatgaatcaacagcgtagtaga cgctttcgctcggccaaagaagccgaaactttggaacgtttagccctgagccggggtgag gtgagagaacatgaacggttcgatagtaactgtataacaccaggtactgaattcatggaa cgtttgcatgaggctttacgctacttcataaaaagtaaaattagtgctgatcctatgtgg caaaagtgtagggttatactgagcggtcataatgctcctggagagggtgaacataaaatt atggattacatacgctatctgaaatctcaaaatgattttgatcccaacacaagacattgc ctttatggtttagatgctgatttaataatattgggattatgcacgcacgaattgcatttc gtagtattgcgtgaagaagtcaaatttggacgaaagaataaaaaagcctcagtcgaagag acgcggttcttcttattacatttgcgactgttgagggaatacttagaactggaattcgat gagttaaaacaatatccaagttttgacatagccaaacttattgatgattgggtgctgatg ggctttcttgttggcaatgattttataccacatttgccattcctaaatatatcatcgaat gcattacctctcctctacaaaacatataagaaagtctatccggaattaagaggaaatata aatgagaatggcagcctaaacttggagcgtttggaaaaatactttgaggctttatcagag gttgaattcgaaaatttccaagaaaactatgctgatctgaagtattttaatactaaacag aatggtgtcgatgaggcatttgactttgatgtcagcgaaattaatgccgaaaaggttgat gatgatttggcggcactgattgaaagtagtaaacagttcttggatgacgaagaagatttg tctgatgaagaaggccagcatatcacagacgaatttgagaacttcaagcgcaactattac atgaacaaattgaatcaggaaaatagtgacagtgcatataaaaaggaacaggcaatttgc tacataacggccttgcaatggatactagactactattaccgaggagtgcgttcctgggga tggtattacccacatcattatgcaccatttataagcgatttgaagaactttaaagatcat gtaattaaatttgatatgggtaaacctttcttaccctttcaacagttattggcagttttg ccggcagctagtaaagcactattacccacggcgtatagagatctcatgacgagtccccaa agtgaactaatagatttttatcccgaagattttgaaactgatctcaatggaaaaatgaac gaatgggaagcggttgtgctcatacctttcatagacgaaaaactcttgttgcaggctatg gagccatgcgatcaaaacttatcgcctgacgaatataaacgcaatcaacatggcccgatg ttgcagtatgattacaatcctgaatcgcaggggcaatcccctgggatttattctctaaag gctttgtaccatgtctattgtactgaaaaacctttttggtcaagggatataatggtacca gcagaccgaactgtatgtaaagaattaccgaatgctgcgcggtcggtattctttccggga tttcctactatgaagcatttagattataagtttgaattgagatgtgctcgggttaaagta ttcgattatcctgcacgcaatgaaaatatgatattgcagccaatggctcgtaaaaatttg gatgatgttttcgctgttgctgagcaaatgcttaaccaaactgtttacataggatggccc cacttgatcaaagctaaggttgtgggaatatcaaacaaagaaaagtacatcgacacggac ggtattaaggatatggagcctaaaatatacgatttacacttgagagctgtgcaggaacat ttaatgacacgcatgggtatagaattcgcagatttgtcagtgctggttcatgtgcgcacc tatgttggatcgtcgtacatttgtggcagccagggtaaggtgtcgctgagcgaaatgtgg agcacaacaacaacagcttatccagcacaaggagttgtctcacaaattgccgtgcaaaac actttaaccaaccaagtcaaaaagatcgaacaactatttccggaaaatagtcgcatattc tttgttgggaatccttactatggcagtgagggagttgttatgaatcccatgttagtatac gaatgcggcagactcaaagtaaacataactgtattgcctgaaccaaatttcgcagaagca aaatacatacaaaatcagctcgaaaatgagtacataccctcccatcaagctgctgttcaa attggcatacagataaagtgtctggctcgcctaaccggctccgtgttggttgtaaaggga gcccgacgtcccaaatcagatcttccaaacaacttggccaaaataaacataggtttacaa tttaagtacttcaaatcaaacgaagaacttgtgggttacacacggcgcattcataaccag tggtttatgtcttctaaggcaatcgccttagtacaatcatatgtggaaaaattcccctta ataattgaatacttaagcacttccaacgatcgcagcgatcttttgttcgaacaggatatt tttcccaatgatgtgggagagggaaagctggaagctatagcagcatggcttaaagaccaa ccgcactcaaaggcggagaaaatagcttgcggctcaaaaactatggaaaaagaagctgtg gagaaagttttggaagccatggaggaattaaagactctgcccgttaagactgtgaagttg caggttaaacctcatcttttgctaaaaccagatgttagtttacctagcatttataagccg aaacgatctataaaactatttgatcgtgtggttgtggttaaaaccacttatatggttcct ctaggttcgaaaggcacagtgattggagtatatccagtaagcgatccaaatcctgtgcgt ttggaatgtgttagggctgtggaaaacttctatgaagtcctctttgataaaactttgcca aatggtaatgatgtgcatggcattgcagaacaacgtgtgtacaaagttcccgaatcttcc gtcctattaatatttactcaaggtaacaacaatgaacaattttacgaagcgaaactgcaa ttagaagagagtagaaacgacagcgtgaaattgaaatctcaatcagtgggaaataataca aataccactaccgttgttagcaacgaaacgaaagtaccccaaattgtacaaaaaggtagc aatgacttctggatgccctcgctaaatacgaaaattaagcattctggcaatggtggaatg acaaatcgtaccacttcctcctctggagttgcaaacacagcaacacaagaagcacaaaca aatcagctaaaaatacttcaaaacccacttcatttgaatcaaataaacgatagcgtcgta acaggaacagcagaatgtcaagaatttcaagatggcacgcatgcattgaagtctttgttg ggtattgtcccatcgcagtctcctttatatcaaacacaaacttcgccaaatgtatccaag gcacaattacccaaacctccaaccagttggagagctgatgctcaaaagtttcccctgcct caaacatatccgcaattaccactacaccaaccaccatttagccagggaaatgctccggta gcagtaatcggcggcaacgtaattcctctgcctacgcccacatgtaaagatcaaaatcca ccgcaattcgtttttaattccaatagtttgaatcaaaagggtgcatttatacccttacaa gttgctcgtggtaatagccaaacgtcggaggcaccagttccaggtactgctttaacgatc aacaacagtaatattgttagcagtgtgacggcttcctgtgccacaaatgttttaacacaa aatctctcccaattggcagttagtactggtggaaatgaggtaaatgtttcatcaggacat ccaggcgccactgttacaagtgtcgaaaagactgcttatgggcggaagaaaccacctcgt gttccgaaaatcggtgcaaaatttgatgttgcctattaa

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