Streptomyces californicus: I6J39_05325
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Entry
I6J39_05325 CDS
T07611
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
scal03051
]
I6J39_05325 (pafA)
Enzymes [BR:
scal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
I6J39_05325 (pafA)
Proteasome [BR:
scal03051
]
Prokaryotic proteasome
Bacterial regulatory particles
I6J39_05325 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
QRV26779
LinkDB
All DBs
Position
complement(1173815..1175176)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDLTGRRKVRLASGREASAIEVQREYYEKAVDFVERRGIRTGTV
DQVLELWGRTLDAIEAEDLDRIDTEIDWVMKYKLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLFYLLEKKGQTARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcacctgacgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaacgtctttctgcggaacggcgcccgcctctacctcgacgtgggatcg
catccggaatacgccacacccgagtgcgacaacgtgaccgaactggtcacgcacgacaag
gcgggcgagcgcattctggaaggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgcgggcgacgtctatctgttcaagaacaacaccgactcggcgggaaactcctac
ggatgccacgagaactacctcgtggcccggcacggggaattctcccgactcgcggacatc
ctcattccgttcctcgtcacccgtcagctgatctgcggcgcgggcaaggtgctccagacc
ccgcgcggcgcggtctactgcgtcagccagcgcgccgagcacatctgggagggcgtcagc
tccgcgacgacccgctcccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcggtaccgccgcctccacgtcatcgtcggtgactccaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctggtgctccgcatgatcgaggcgggcacggtgatg
cgcgacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacctcacc
ggccgccgcaaggtgcggctggccagcggccgggaggcatcggccatcgaggtccagcgg
gagtactacgagaaggccgtggacttcgtcgagcgccggggcatccgcaccggcaccgtc
gaccaggtcctggagctgtggggccgcaccctcgacgcgatcgaggccgaggacctcgac
cggatcgacaccgagatcgactgggtcatgaagtacaagctcatcgagcgctaccgggcc
aagcacaacatgaccatgtcgaatccgcgggtcgcccagatagacctcgcctaccacgac
atccaccgccgccgcgggctcttctacctcctggagaagaaggggcagaccgcccgcatc
tgcaacgacctgaagatcttcgagggcaagtcggtgcccccgcagaccacccgggcgcga
ctgcgcggcgacttcatccgccgggcccaggagcagcgcagggacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgcacggtcctgtgcaaggacccgttccgc
tccgtggacgaacgggtggagaagctgatcgccggcatgtga
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