Streptomyces californicus: I6J39_18385
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Entry
I6J39_18385 CDS
T07611
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scal
Streptomyces californicus
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scal03021
]
I6J39_18385
Transcription machinery [BR:
scal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J39_18385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
MarR_2
HTH_23
DUF7343
Sigma70_ECF
GerE
HTH_3
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QRV29055
LinkDB
All DBs
Position
complement(4206443..4207303)
Genome browser
AA seq
286 aa
AA seq
DB search
MPISTTAPALATDAPHAPLPQIRDPRKVAPKDARVLSTIFFERLRVLEEGTHEYQYARNT
LIETNLSLVHFAARRYRSRGSGEMEEIIQVGTVGLIKAIDRFDLSREVEFTSFAIPYIVG
EIKRFFRDSTWAVHVPRRLQELRVTLAKAKEELAGRLDRDPTVQELARHLELSEDEIIEG
LVASNGYTAGSLDKPVGSEQDNASAVTYGDTEGDIDPAIERVEDLHALAPLLEDLSDRDR
SIVAMRFGQEMTQSEIGRQLGISQMHVSRLLTHLLGRLRTGMLAHG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccgatatccacgacggctccggccttggccacggatgcgccgcacgcaccgctcccg
cagatccgcgaccctcgcaaggtggctccgaaggacgctcgcgttctcagcaccatcttc
ttcgagcggctgagggtgctggaagagggcacgcacgagtaccagtacgcgcgtaacacc
ctgatcgagacgaacctgtcactggtccacttcgccgcacgccggtatcgcagccgtggc
agcggcgagatggaggagatcatccaggtcggaacggtgggcctgatcaaggcgatcgac
cggttcgacctcagccgggaggtggagttcacctccttcgccatcccttacatcgtcggg
gagatcaagcgtttcttccgcgactccacctgggcggtccatgtaccgcgccgccttcag
gagctgcgcgtcaccctggccaaggccaaggaggaactcgccggacggctggaccgggat
cccaccgtccaggaactcgcccgccatctggaactcagcgaagacgagatcatcgagggc
ctcgtcgcctcgaacggatacaccgcgggatccctggacaagcccgtcgggagcgaacag
gacaacgcgtcggccgtcacctacggcgacaccgaaggggacatcgatcccgccatcgag
agggtcgaggatctccatgcgctggcgcccctgctcgaagacctcagcgaccgcgaccgg
tccatcgtggccatgcgcttcggccaggagatgacccagtccgagatcggccggcagctc
ggcatctcccagatgcacgtctcccggctcctgacccatctgctcggccgcctccgcacc
gggatgctggcgcacggatga
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