Struthio camelus australis (South African ostrich): 104138750
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Entry
104138750 CDS
T08512
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104138750 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104138750 (PRPF40A)
Spliceosome [BR:
scam03041
]
Complex A
U1 snRNP components
U1 related factors
104138750 (PRPF40A)
Complex B
104138750 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
104138750
NCBI-ProteinID:
XP_009664806
Ensembl:
ENSSCUG00000003728
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVAVAPPGTQNSVLFRPQTTHPVVCAAQQTTTTTNSSVN
EEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGK
PYYYNSQTKESRWAKPKELEDLEAMIKAEENSSKPEESTPTTATSAAAAEATNTTTTATA
AAETAAAVTSTAATTAATAASEAEATAASSVAENESTVTGTSEDQGQQATAASAGQEQSA
ETTANAVEDSSKQEASGDGASKKEEEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNA
SWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLEN
HEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEA
LKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEE
EEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP
VFSSGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRA
TTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWED
IRDRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSR
SGTESEDDDSHSKKKRQRSESRSLSDRSSSAESERSYKKSKKHKKKSKKRRHKSDSPESD
IEREKDKKDRERESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRT
LLEQLDEDQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggccacccaggcatgccacattatccgcccatgggaatgcaccccatgggtcaaaga
ccacctaatatgccaccagttccgcatggtatgatgcctcagatgatgcctccgatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtcccaagctgctatgcagcctacggttccgccaggagtgaacagtatggat
gcgcaagtagccgtagcaccacctggaactcagaactctgttttgtttcgccctcagaca
acgcatcccgtagtttgtgcagcccagcaaaccaccaccaccaccaacagttctgttaat
gaggagcattctaaacagaagtctacgtggacagagcacaaatcacctgatggaagaaca
tactactacaacactgaaacaaagcagtccacgtgggagaagccagatgatctcaaaaca
cctgctgagcaattgttgtctaagtgtccctggaaagagtacaaatctgattctggaaag
ccctactattataattcccaaacaaaggaatcacgctgggcaaagcccaaagaacttgag
gatcttgaagcaatgattaaagctgaagaaaacagcagcaagcccgaagaatccactcca
acaacggctacttcagcagctgcagcagaagcaacaaacacaaccaccacagccacagct
gctgctgaaactgccgcggctgttacctctaccgctgctactactgcagcaacagcagcc
tccgaagcagaagctactgcagcttcttctgtggcagaaaatgaaagtactgtcacaggc
acatctgaggaccagggacagcaagcgactgctgcatctgctgggcaggagcagagtgcg
gaaactacagctaatgcagtagaggactcctccaagcaggaggcttcaggagacggtgct
tcaaagaaagaggaggaggatgcccaaccagttaaaaaaacctatacgtggaatacaaag
gaagaagcaaagcaagcgtttaaagaactattaaaagaaaagcgagtaccgtccaatgct
tcatgggagcaagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaag
ttaagtgaaaaaaagcaagcctttaacgcttacaaagttcaaacagagaaagaagaaaaa
gaagaagcaagatcaaaatataaagaagctaaagaatccttccagcgttttcttgaaaac
catgaaaagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatg
gaagtctggaatgccatctctgagcgtgatcgtctggaaatttatgaagatgtcttgttt
tttctgtctaagaaagagaaggaacaagccaagcagttacgaaagaggaactgggaagct
ttgaagaacatattagataacatggctaatgtcacttactgtacaacttggtcagaggct
cagcagtatctgatggacaatcctacctttgcagaagatgaggaacttcagaatatggat
aaggaggatgcactgatctgttttgaggaacacatcagggcattagagaaagaggaggag
gaagaaaagcagaaaagtttgcttagagaaagaaggcgacagcgtaaaaatagagagtct
tttcagatatttttagatgaattgcatgaacatggacagttgcattcaatgtcctcttgg
atggagttgtacccaaccataagctctgacatcagattcactaatatgcttggtcagcct
gttttttcatcaggatcaacagcgcttgatcttttcaagttctatgttgaagacttgaaa
gcacgttaccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtg
gttgaagtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagct
actactttagatgcaggaaatatcaaactggctttcaatagtctgctggaaaaggcagaa
gcccgtgaaagagagagggaaaaagaagaagcccgcaaaatgaagcggaaagagtccgcg
ttcaagagtatgttgaaacaagctacacctccaattgaattggatgctgtctgggaagat
atcagggatagatttgtgaaggaaccagcatttgaagacatcactctagagtctgaaaga
aaaaggatatttaaagatttcatgcatgtcctagagcatgagtgtcagcatcatcattca
aagaataagaaacattctaaaaagtctaaaaagcatcacaggaagcgatctcgctctcgt
tcgggcacggagtctgaggatgatgatagccattcaaagaagaaaaggcagcgttcagaa
tctagatcactttctgatcgttcttccagtgcggaatctgagagaagttacaagaagtca
aaaaaacacaagaagaagagcaagaagagaagacataagtcagattcaccagaatcagat
attgaacgagaaaaagacaaaaaagatagagagagagagagtgagaaggatagagctaga
caaagatctgaatcaaaacataaatctcctactaaaaaaagacctggaaaagattctggt
aactgggatacctctggcagtgaactgagtgaaggggagttggaaaaacagaggaggacg
cttttggaacaactggatgaagatcaatga
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