Struthio camelus australis (South African ostrich): 104142222
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Entry
104142222 CDS
T08512
Symbol
PASD1
Name
(RefSeq) PAS domain-containing protein 1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scam03000
]
104142222 (PASD1)
Transcription factors [BR:
scam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104142222 (PASD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
TED_2
Motif
Other DBs
NCBI-GeneID:
104142222
NCBI-ProteinID:
XP_009670344
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQK
QKEITAQTEACEIRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLG
HLPSDLVDQNILNFLPEREQSEVYKLLSPHVLMTDPVAADFLNAEKQIEFCCHLARGSLD
PNEPLTYEYVKFVVDFKYFTHVPTPSCNGFESAIARAFRSATEEQICLVATVRLVTPQFL
KELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLAR
CHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRA
ERRRDLGLEESSIELASSSLKSHGSYLDIRQCGNSQEASREGVSLSSHSSRRSSHTALSD
SASTSSMRHTDTSTPTRPSVPMGQSEKAALRLASSGSAQAIATPQAPGDHLTQHPVAQPA
VPSQQAVMPVYHFPAQLGMMHQLKEQLEERTRILQADIKTQQEELHVIKEQLQLVQDSNL
QMLMQQPMPLVFNNVPHQSPRRPSQQQQPGTTRQSTAKKSQQQGLPGTKHYCGPHLPSPR
QFLREPGGPSSQGQQQQQPQLLSERVNRKAGKDSASQTGLWCALRLQSVFALAERSAMAK
NAFLKLAVRNLNICLPWLASAFAPLQKVAGSVCPRLDACSSWQYPSTQSSASRQQGKEAS
AVAYFPFVKPKMFDEVTEETYNLKTLRFLQVQSGTHNGEGKPGACFWQTLCGLTNFVPVC
EHLRSPAFVPEQQILPPPIQMQPITCSTVRPPAPSPVFSPSLMIPHTSFTSHQTSTPVHL
HQWPQQQVQQHHLYLQMQGRESVPGGPNQRVFQASHAPQQSPMGYFVHPQQPSRHAQGQP
CSLPDLPEMPRLDNAAKSRNTTFA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaggacagggcaaagagggcatcacgcaacaaatctgagaagaaa
aggagagaccagttcaatgtcctcattaaagagctttgcacaatgctgcaaggccatggc
caccctctcaagatggacaagtccacaatcctgcagaggaccatcgacttcttacagaaa
cagaaagaaatcacagcacagacagaagcctgtgagattagacaagactggaagccttca
tttcttagcaacgaggagttcacccagttgatgttagaggcattagatggctttctcatt
gctcttaccactgatgggattattatttatgtatctgacagcgtctcatctctgcttgga
cacttaccgtcagatttggtggaccaaaatatattaaactttctgcctgagcgggagcag
agcgaggtgtacaagctcctttctccacacgtgctcatgacggatcctgttgcagctgat
tttttaaacgcagaaaagcaaatagagttttgctgccatttagcaagaggcagcttagat
ccaaatgaacccctgacatatgaatatgtgaaatttgtagtggattttaaatattttact
catgtgcctacaccctcctgtaatggctttgagtcagctattgcacgagctttcaggtca
gccacggaggagcagatttgcctcgtagcaactgttcgtcttgtcacaccgcagttctta
aaggagctctgcaatgttgaggagccatgtgaagaatttacatcaaggcatagtttggaa
tggaagtttttattcttggaccacagggctccacctatcataggatacctaccttttgag
gtgctgggaacgtcagggtatgactactaccacgcagatgacctggagcttcttgctagg
tgccatgaacacttgatgcagtttggaaaaggcaagtcctgctactacaggttcctgacc
aaagggcagcagtggatctggctgcagacgcactactacatcacctaccaccagtggaac
tccaagcccgagttcatcgtgtgcacccacctcgtggttagttatgcagaagttcgagct
gaaagaaggcgagatcttggccttgaagagtcatcaattgaactggcatcctcctcttta
aagagccacggcagctacctggacatcaggcagtgcggaaacagccaggaggccagccga
gaaggagtgtcgctctcgtctcacagctcccggcgctcctcgcacacggcgctctccgac
tctgcgtccacatcatcaatgcgacacacagataccagcactcccaccaggccatcagtg
ccaatgggtcaatcggagaaggcagccttgcgactggcatcaagtggaagcgctcaggcc
atagcaactcctcaagcccctggtgaccacctcactcagcatcctgtggctcagccagca
gttccttctcagcaagctgtgatgccagtgtaccacttccccgcgcagctggggatgatg
catcagctgaaagagcagctggaggagaggactcgcatcctgcaagctgacatcaagaca
cagcaagaggagctgcacgtcatcaaggagcagctccagctagtgcaggactccaacctg
cagatgttgatgcagcaaccaatgcccttagtctttaacaacgtgccgcaccagagtcca
agaaggccgtcgcagcagcagcagcctgggacaaccaggcaaagcacagccaagaagtcg
cagcagcaaggccttcctgggacaaaacactactgtggccctcacttaccgtccccacgc
caattcctcagggaacctggtggcccttcttcccaggggcagcagcagcagcaacctcag
ctgctgtcagagagggtgaacaggaaagccggcaaggacagtgcttcccagaccgggctc
tggtgtgctctgaggctccagagcgtctttgccctagctgagagaagtgctatggcaaaa
aacgcttttttgaagctggcagtcaggaatttgaacatctgtcttccctggctggcctct
gcttttgctccactgcagaaggttgctggatcggtctgtccacgcctggatgcctgctcc
tcctggcagtatccgtccacccagagcagcgctagcaggcagcaaggcaaggaagcctcg
gctgttgcttactttccttttgtgaagcctaaaatgttcgacgaagtcacagaggagaca
tacaaccttaaaacccttcgttttctccaggtccagtctggaacgcataatggagaggga
aaacctggggcctgtttttggcagactctatgtggtttaacaaattttgtcccagtctgc
gagcacctgcgttctccagcatttgtcccagagcagcagatcttgcctcccccaatacag
atgcagccgattacctgcagcacggtccgacctccagccccgtcgcccgttttctcccca
tctctgatgatcccacacaccagtttcacgtcccaccagacgagcaccccagttcacctc
caccagtggccacagcaacaggttcagcagcatcatctctaccttcagatgcaaggtcgt
gagtcggtgccgggggggccgaaccagcgcgttttccaggcatctcacgccccgcagcag
agtcccatgggctacttcgtgcacccgcagcagccgagccgccacgcgcagggccagccc
tgcagcctgcccgacctgccggagatgccaagattggataatgctgctaagtcacgtaac
accacttttgcctga
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integrated database retrieval system
