Struthio camelus australis (South African ostrich): 104146326
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Entry
104146326 CDS
T08512
Symbol
PAPD5
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD5
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104146326 (PAPD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104146326 (PAPD5)
03016 Transfer RNA biogenesis [BR:
scam03016
]
104146326 (PAPD5)
Enzymes [BR:
scam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
104146326 (PAPD5)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
104146326 (PAPD5)
Transfer RNA biogenesis [BR:
scam03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
104146326 (PAPD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
DUF4283
Motif
Other DBs
NCBI-GeneID:
104146326
NCBI-ProteinID:
XP_009676611
Ensembl:
ENSSCUG00000011689
LinkDB
All DBs
Position
Unknown
AA seq
490 aa
AA seq
DB search
MSPRPEEERMRMEVVNRIENVIKELWPNADVQIFGSFKTGLYLPTSDIDLVVFGKWETLP
LWTLEEALRKHNVADENSVKVLDKATVPIIKLTDSFTEVKVDISFNVQNGVKAAQLIKDF
IKKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHPREDACMPNANYG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSMLDGYRPSMLYIEDPLQPGNDV
GRSSYGAMQVKQAFDYAYVVLSHAVSPIAKYYPNNETESILGRIIRVTQEVATYRDWISK
QWGMQSRTESSCNGNGVTLIVDTQQLDKCNNNLSEENEALGKPRNKTSETLSKHSSNSSS
GPLSSSSSTLSSSSDVDSDGTPCKTSKQLSCRQSTTNRVGSQEVSLESSQSSGKTQNSQT
ANTSSNTNKSQHGSARLFRSSNKGFQGPTNSSHGTSVTNKQHQGSKSHHQYFHGKKRKHK
RDAALSDLCR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagacctgaagaagagagaatgcggatggaagtggtgaacaggatagaaaat
gttataaaagagctctggcctaatgcagatgtgcagatatttggaagttttaaaactggt
ttatatttgcctacaagtgatattgacttagttgtgtttggaaaatgggagacgttacct
ctttggaccctggaagaagctcttagaaagcacaacgttgcggatgaaaactcagtaaag
gttttagataaagcaactgtacctattattaaactgacagattccttcactgaagtaaaa
gttgacatcagctttaatgtgcaaaatggggttaaagcagcccagctcatcaaagatttt
atcaagaaatatcctgtattaccatatctagttttagtattgaaacagttcctgttgcag
agggaccttaatgaagtgttcacaggtggaattggttcttatagtctttttttaatggct
gtcagtttccttcagctgcatcccagggaagatgcctgcatgcccaatgccaactacggt
gttcttttaatagagttttttgaattgtatggacgtcacttcaattatttgaagactgga
atccgaataaaggatggtggctcttatgttgccaaggatgaagtacaaaaaagcatgctg
gatggctacagaccatcaatgctgtatatcgaggatccgttacagccaggtaatgatgtt
gggaggagttcatacggtgccatgcaagtgaagcaggcttttgattatgcctacgttgtt
ttgagccacgcagtttccccaatagctaaatattatcctaacaacgaaactgaaagtata
ttaggtagaataattagagtgacacaagaagtggccacatacagagactggatatcaaag
cagtggggaatgcaaagtaggactgagtcttcgtgtaatggtaatggagtaaccttgata
gtagatactcagcagctagacaaatgcaacaataatctctctgaagagaatgaagcactg
ggaaaacctagaaataaaacttctgaaacacttagtaaacattcttcaaattcttcatca
ggtcccttatcatcatcatcttctacattgtccagctctagcgatgtagattctgatgga
acaccttgcaaaacctctaaacaattgagttgtcgtcagtctaccacaaacagagtgggg
tcacaagaagtatcactggaatcctcccagtcaagtgggaaaacgcaaaatagccaaaca
gccaatacatccagcaacacgaacaaatctcagcatggatcagcacggttatttcgctct
tctaacaaaggctttcaaggtccaacaaactcaagccatggtacctcagtcacaaacaaa
caacatcaaggcagtaaatcacaccaccagtacttccatggcaaaaagaggaaacacaag
agggatgcggccctttcagacctttgtagatag
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