Serinus canaria (common canary): 103815853
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Entry
103815853 CDS
T05755
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scan04990
]
103815853 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
scan04990
]
Other domain-containing proteins
Patched domain-containing proteins
103815853 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
103815853
NCBI-ProteinID:
XP_009087961
UniProt:
A0A8C9NRZ5
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MVLRGPWGSCGGPGAALALLRALRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTDDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgagggggccgtgggggagctgcgggggccccggcgcggcgctcgctctcctg
cgcgccctccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcctcggcacccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaagagagcgtggagcac
ctcctggcccccacgcacagcctggccaagatcgagaggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgcctgggaggtacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgcagtgaccaggatccaagttcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtactggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtacaatgggcaccagctcggtggg
gttactgtgcacagcaaggaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagagaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttcc
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcacg
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgacagtgacccttgccaccctgactgct
gctgggatcatcaatctcactggtgggaaatacaattccaccttcctgggaatccccttc
gtcatgttaggtcacgggttgtatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacacgttaaagagaggactgcagctgtatttgcagactccatgctctcg
ttttctctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctatatagaaaacaac
taccagcatagtatcttctgcagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagcgaggacacggatgattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttcctgaaacgctactattgtgactgg
ataacaaacacttatgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaggggtcggacctgagcaacatcgtagcgacc
gcgactcggaccatcgagtacacaactgcccagcagaagtatttcagtaactacagcccg
gtcattgggttctacatctacgagtcaatcgagtactggaacaccagtgtccaggaggat
gtgctggagtacaccaagggctttgtgaggatatcttggttcgaaagctacttaaattac
cttaggaaactcaacatatctactggattgccgaagaagaatttcactgatatgttgagg
aactccttcctgaagacccctcagtttgcccatttttcagaggatatcatcttttccaag
aaatacaacaatgaagttgatgttgtggcctccaggatgttcttggtggccaagacaatg
gaaaccaagagggaagaactttatgacctcctggagaccctgaggaagctctctctcacc
tccaaggtgaaattcatcgttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaacgtctggctcactctaactgttgcctcggtt
gaatttggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttaatttatggaattaattatacaattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatactgactttcctgccaccctccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcaccagagtggttgaccaaattacaacagtctaa
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