Serinus canaria (common canary): 103816593
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Entry
103816593 CDS
T05755
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103816593 (TDRD12)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103816593 (TDRD12)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103816593 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103816593
NCBI-ProteinID:
XP_030083636
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MEVVVLKAEDPSCFWIAVKECVPGVVVETVYENLNVEMEQFYSCYKDADEVKQEEITKGQ
VYVVFSEELKCWCRALVESVRCQADGYQLGCFLVDYAKYCSVPSENIRVLTGAFAKIPHR
AKKCRLHCTKPLTLHIDYCENTAKIGPAKRWDTAAIQHFRKLLEEATEVKATIQTVEDKV
LEVFLFVTIKDEKICVNDDLVAKHFAHYKEDEGTAGSSSDVSDDEVSLNAECVPVEFVGP
TFLARPKLPFGEKVSPHLGPGLAGCNSVAEKPSQRSHTNLNHSTVPVVSMVPGLPSKEDK
AVQTERLPQFSNSSFLQTHTVEDGQQSLQDVGKEKNFVFLNKKIEPSSVLETAPLLDGLK
KELDRKKFSGPTFTQSYCWPPIAWGRDVVAISHQGNDPLLYIPPVLTLLQESDYPALPNM
SGPLALILCPGWKKAQLVFDLLKTYRKGCRRLHPMLMTLGLNKEAASQMELQGCEVVVTT
PYNLLRLLEHNTGFLCRLCHLVLDEIEVLFSDTSEQVFTILDCYKKATAQARGNLPHQII
AVGTQWNKHITPLIKEFMIDPHILITVIEEAAIFGNVQQVVQPCINSDRTAELLKILDSA
QRNLQKVLVFTDSVTEAEMIHKALKSNSIVSLKKHKESKCTAKCVLERWRKMYSSGTPAV
LVLTDDCLQSMGITDATWVIHFSFSSPAVFGQRLQSMSDNFCPGIKDSAVDQEDTKAKSI
ILLTESSFCHAPEIFYYLKHAEAEIPEELYDLTARVQESEEDEKFSRPLCASLKTFGICR
NRTECPDRHQINLSIDIAQNIAAEMIETPERVTILPLFIVHATNYFGRIVRKQKDQYTVL
AKEMNDYFKVPGHRISVNTVEKSVFYGLREGAICHRVQVVETPAKDEENVCKVTVKYIDE
GRTSQVNSDQLLHLPVKFQSLPPQAVEIIVCRVKPIDNEVEWNPKVTDHINHKIKGKLHH
AKVVHTLGKTVWVDPMVGVTNLPTMKMWINEYNIRSEILSTGLGTDNPEHVAEIQKLCPQ
IPVLDHGQSLEHLPSKPETTVEKLGTSVQALLLRSTKEDTADLEEVSSPQDPSLEEDSAE
SCNSPVTPPSNDVVQTKEAEETTVNQQKGCHPQIKWFQDDVSVTLKVQILRAADSRCEFC
REKVTFSAYSEGKFYVADLELYQSVIAEKSTCVIKETEAVILLVKEKKGTWCKLLKNKNV
HVSLDFECWEASEDERPFTVGSGKLNYPPAGSEEWFESSEDSGTESDE
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgtggtattaaaggctgaggaccccagctgcttttggattgctgtgaaagaa
tgtgtgcccggtgtagtcgttgaaacggtgtatgaaaacctgaatgttgaaatggagcag
ttttatagttgttataaagatgcagatgaagtaaaacaagaggagataacaaaaggccag
gtttatgtggttttcagtgaggaactgaagtgctggtgcagggctctggtggagtcagtg
cggtgccaggcagatggttaccagctcggctgtttccttgtggattatgccaagtactgc
tctgttccatcagagaacattcgagttttaacaggagcatttgcaaagatcccacacaga
gcaaagaagtgtcggctgcactgcacaaagccactgacactgcatattgactactgtgaa
aacactgccaaaataggaccagccaaaagatgggatactgctgccattcagcattttcga
aagcttcttgaagaggctactgaggttaaagccacaatacagacagtagaagataaagtg
ttagaggtgtttctttttgtgactataaaagatgaaaagatctgtgttaatgatgatctg
gttgcaaagcactttgctcattacaaggaagatgaagggactgcaggcagttcttcagat
gtttctgatgatgaagtgtccttaaatgcagagtgtgttccagtggagtttgttggtcct
acgtttcttgccaggccaaaactgccctttggggagaaggtgtcaccacatcttgggcca
ggtcttgctggttgtaattctgttgctgaaaagccatcccaaaggtcacacacgaatcta
aatcacagtactgtgcctgtggtcagcatggtgccaggtttgccttccaaggaagataaa
gcagttcaaacagagaggcttccacagttctcaaattccagtttccttcaaacacacaca
gttgaggatggccaacagagtttacaagatgttgggaaagaaaaaaactttgtgttcctg
aacaagaaaattgaaccatcatcagttttggaaacagcaccacttcttgatggtctgaaa
aaggaacttgataggaaaaagttttcaggtcctaccttcacccagtcctactgttggcca
ccaatagcttggggacgtgatgttgttgccatctcccatcagggaaatgatcctttatta
tatattccaccagttcttacacttctgcaggaaagtgactatccagccttgccaaacatg
agtgggccactagcactgattttatgtcctggatggaagaaggcacagcttgtttttgac
ctgctgaaaacgtacaggaaaggctgcagacgccttcatccaatgctgatgacccttggg
ctgaacaaggaagcagccagccaaatggaactccaaggctgtgaagtggtagtgactaca
ccatacaacctcctgagactgctggaacataacactgggttcttgtgtaggctttgccat
cttgttcttgatgagatcgaggtgctgttctctgacacttctgaacaggtgtttactata
ctggattgttacaagaaagccactgctcaagcacgggggaatctgccacatcagatcatt
gctgtgggaactcagtggaataaacatatcacacccttgataaaggagttcatgattgac
cctcacattttgataactgttattgaagaagctgccatctttggaaatgtgcaacaggtg
gtgcagccctgcataaacagcgacagaactgctgagttactcaaaatcctggattctgcc
cagaggaatcttcagaaagtgctggtcttcactgactcagtaactgaagcagagatgatt
cataaggcactgaagagcaattcaatagtttccttgaaaaagcataaagagagcaagtgt
actgctaagtgtgtcttggagaggtggaggaaaatgtacagttctggcactcctgctgtg
ttagttttaacagatgactgcctgcagtccatgggaatcacagatgcaacttgggtgata
catttcagtttctcatctccagcagtctttgggcagcgcctgcaaagcatgagtgacaac
ttctgccctggcataaaggattctgctgtagatcaggaagatacgaaggcaaagtcaatc
attctgctgacagagagcagtttttgtcatgcacctgagattttctactatttaaagcat
gcagaagctgaaattccagaagaactctatgatttgactgccagggtgcaggaatctgag
gaagacgagaaattttcaagacccctgtgtgcttcccttaaaacatttgggatttgcagg
aacagaacagagtgtccagatcgtcatcaaattaatttatcaatagacatagcccagaat
attgcagctgaaatgatagaaacacctgaacgtgtgacaatcctgcctctcttcattgta
catgcaacaaactactttggccgaatagtcaggaaacaaaaggaccaatatacagttctt
gctaaagaaatgaatgattacttcaaggtaccagggcacaggatttcggtgaacactgtg
gagaagtcagtgttctatgggttacgtgagggagccatttgccacagagttcaggtggta
gagactccagcaaaagatgaagaaaatgtctgtaaggtcacagttaagtacatagatgaa
ggcaggacaagtcaagtgaacagtgatcagctgcttcacttacctgtgaagtttcagagt
ctgccacctcaggctgtggaaattatagtgtgtagagtaaaacccatagataatgaagtt
gaatggaatccaaaggtgactgatcacatcaatcacaaaattaaaggaaaacttcatcat
gcaaaagtggtgcataccttgggaaagacagtttgggttgacccaatggttggggttacc
aatcttcccacgatgaagatgtggatcaatgagtacaacattcggtccgagattttgtca
acgggtttgggaactgacaatcccgaacatgtagcagaaattcagaagctgtgcccacag
ataccagttttggatcatggacagagcttggagcatttaccttctaagcccgagactacc
gttgaaaaattgggaacttcagtacaggctttgttactaagaagcacaaaagaggacaca
gctgatctagaggaagtgtccagtccacaggatccatcgctagaggaagattctgcagaa
agctgtaacagtcctgtgactcctccaagcaatgatgtagttcaaacaaaagaagcagaa
gagactactgtgaatcagcagaagggctgtcatccacaaatcaagtggtttcaggatgat
gtgagtgtgacactgaaggtccaaatactgagggcagctgacagtagatgtgagttctgt
agagaaaaggtgactttcagtgcttattcagaaggcaaattttatgtggctgacctggag
ctgtatcagtcagtaattgcagagaagtccacatgtgtgattaaggaaacagaggctgtg
attttactggtaaaagagaaaaaaggaacatggtgcaaattactgaagaacaagaatgtt
catgtgtccttagattttgaatgctgggaagcatctgaagatgaaaggcctttcacagtt
ggttctggaaaactgaactaccctcctgcaggatctgaggagtggtttgagtcctctgaa
gacagtggtacagaaagtgatgagtaa
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integrated database retrieval system
