KEGG   Serinus canaria (common canary): 103818213
Entry
103818213         CDS       T05755                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
scan  Serinus canaria (common canary)
Pathway
scan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103818213 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scan03041]
    103818213 (SF3A1)
Spliceosome [BR:scan03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103818213 (SF3A1)
 Complex B
    103818213 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    103818213 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 103818213
NCBI-ProteinID: XP_030088630
LinkDB
Position
Unknown
AA seq 790 aa
MPAGPVQAVPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcccgccggacccgtgcaggctgtgcctccggcgcagcccgcgccccctgctgagagc
aaaccgccagaagaggagcctaaagaggaggcagcaccagctaagcctgtggtgggaatt
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aatggtccagagtttgaagcccgaattcgtcagaatgaaataaataaccccaagttcaac
ttcctgaaccccaacgacccttaccatgcctactaccggcacaaggtcagcgagttcaag
gagggcaaagcccaggagccctcagctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagctccctcagaaggtgcaggcccaggtgatccaggagaccgtggttccc
aaggagcccccgcccgagttcgagttcatcgcggaccctccgtccatctcggccttcgac
ctggacgtggtgaagctcacggctcagtttgtggcccgcaacgggaggcagttcctcacc
cagctcatgcagaaggagcagaggaattaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcaccaagctggtggagcagtacacaaagatcttgatcccaccaaag
ggcttactcctcaagctcaagaaggaggctgaaaatcccaaggaagtcctggatcaggtc
tattacagagtggagtgggccaagttccaggagcgagagagaaagaaggaagaggaggag
aaggagaaggagcgtgttgcttatgcccagattgactggcacgactttgtggttgtggaa
acagttgacttccagcccaatgagcaagggaatttccctcctcccaccactccagaagag
ctgggagctcgaatcctgattcaggagcgttatgagaagtttggggaaagtgaggaggtg
gagatggaggtggaatcagatgaggaagatgaaaagcaagagaaaacagatgagcctcca
gcccagctggatcaggacacacaagtgcaggatatggatgaggggtcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaaccccgatgccaccccctctccctcccaca
ccagatcaagtcattgtgcggaaagattatgatcccaaagcctcaaaaccgttgccacct
gccccggctccggatgagtacttggtgtctcccatcactggagaaaagattcctgccagt
aaaatgcaggagcacatgaggattgggctcctggatccacggtggctggagcagcgagat
cgatccatccgggagaagcagagtgatgacgaggtctatgccccaggtttggatattgag
agcagcctgaagcagctggcagagcgtcgtactgatatctttggtgtagaggagactgcc
attggtaaaaagattggtgaagaagagatccagaaaccagaggaaaaggtgacctgggat
ggccactcgggcagcatggcccgcacacagcaggctgctcaggccaatatcactctgcaa
gagcaaattgaagccatccacaaggccaagggactggtgccagaggatgacagcaaggag
aagatcgggcccagcaaacccaatgagataccccagccaccccctccttcctcagcctcc
aacccccctgccagtgcccagcccatcacatctgtacctcgcccacccaccatgcctcct
cccgtgcgtgccgccgtggtttctgcagtgccggtcatgcctcgcccccccatgacgtcc
gtggtccggctgcccccaggatctgtcatagccacccccatgcctcccatcatccacacc
ccacgcatcaacgtggtgcccatgcccccctctgctccccccatcatgagcccccgcccg
ccccccatgattgtccccacagcctttgtccctgctcctcccgtggctccggtcccgtcc
cctgcaccaatgcctcccgtccaccccccgccacccatggaggatgagccagtctccaag
aagctgaagagtgaggacagcctgattccagaggaggaatttctgcgcaggaacaagggc
ccggtcacggtcaaagtccaggttcccaacatgcaggacaagacggaatggaagctgaat
ggccaagtgctggtgttcaccctgcccctctcagaccaggtgtctgtaataaaggttaag
atccacgaggccactgggatgccagctgggaagcagaagctgcagtatgagggcatcttc
atcaaggattccaactccctggcttattacaacatgaccagtggctctctgattcacctg
gcactcaaagagagaggaggcaggaagaaatag

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