Scyliorhinus canicula (smaller spotted catshark): 119950607
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Entry
119950607 CDS
T11175
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03013
Nucleocytoplasmic transport
scau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119950607
03015 mRNA surveillance pathway
119950607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119950607
Enzymes [BR:
scau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119950607
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119950607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
119950607
NCBI-ProteinID:
XP_038629120
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All DBs
Position
16:84900062..84954796
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AA seq
328 aa
AA seq
DB search
MLSRTDPKQQYTQCLCLCPTYELALQTGKVIEQMGVYCTDIRVGYAIRGNRIRRGSQVEE
QIVIGTPGTVLDWCFKLGQVDVKRIRVFVLDEADVMIATQGYLDQSYRIHRLLPKDCQML
LFSATFEDPVLRFAKKIVPEPNVIKLRREQLTLDNIKQYFVMCNQNEDKYQALTNIYTAI
TIAQAIIFCQTRRTAQWLSIKLTHDGHSVALLTGNLMVEQRASIIQRFRDGKEKVLITTN
VCARGIDVEQVSIVVNFDLPLTRDKEPDCETYLHRIGRTGRFGKQGLAVNMVDGSRSLDI
LHRIQDHFNRKIEQLDSKDLEQIERIAY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccgtacagacccaaagcagcaatacacacagtgcctctgcctgtgccccaca
tacgagctggccttgcaaacggggaaagtgatcgagcagatgggcgtgtactgtacggac
attcgagttggctacgccattcgtggcaaccgcattaggcgtggctcccaggtagaggaa
caaatagtcatcggcacgccagggaccgtactggattggtgcttcaaactgggtcaggtg
gacgtgaagagaatccgggtgttcgtgctggatgaggcagatgtcatgatcgccacccag
ggctacctcgaccagagctaccgcattcacaggttgctgcctaaggactgccagatgctt
ctattctcggccacattcgaggatccggtactcaggtttgcgaagaagatcgtccccgag
cccaacgtgatcaaactgcgccgggagcaactaactctggacaacatcaagcagtacttt
gtcatgtgtaaccagaacgaagataaatatcaggccctcaccaacatctacactgccatc
accattgcccaagccatcatcttctgccagacccggaggacagcccagtggctttcaata
aagctaacacacgatgggcacagcgtggcacttctgactggcaatctgatggtcgagcag
agggcatccatcatccaacgtttccgagatggcaaggaaaaggtcctgattaccaccaat
gtctgcgccagaggcatcgatgtggagcaagtgtcgatcgtggtgaactttgacctgcca
ttgacccgagacaaggaaccagactgcgagacatatctccacagaatcggccggacagga
cgttttgggaagcaagggctggcagtcaacatggtggatgggtccaggagcctggacatc
ctgcacaggattcaggaccatttcaaccgtaagattgaacagctggactcgaaggacctc
gaacagattgaacgcattgcatactaa
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