Scyliorhinus canicula (smaller spotted catshark): 119954226
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Entry
119954226 CDS
T11175
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03266
Virion - Herpesvirus
scau04081
Hormone signaling
scau04145
Phagosome
scau04148
Efferocytosis
scau04510
Focal adhesion
scau04512
ECM-receptor interaction
scau04517
IgSF CAM signaling
scau04810
Regulation of actin cytoskeleton
scau04820
Cytoskeleton in muscle cells
scau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
119954226
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
119954226
04512 ECM-receptor interaction
119954226
04517 IgSF CAM signaling
119954226
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119954226
04148 Efferocytosis
119954226
09144 Cellular community - eukaryotes
04510 Focal adhesion
119954226
09142 Cell motility
04820 Cytoskeleton in muscle cells
119954226
04810 Regulation of actin cytoskeleton
119954226
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119954226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119954226
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119954226
04515 Cell adhesion molecules [BR:
scau04515
]
119954226
04090 CD molecules [BR:
scau04090
]
119954226
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
119954226
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119954226
Cell adhesion molecules [BR:
scau04515
]
Integrins
Integrin beta subunits
119954226
CD molecules [BR:
scau04090
]
Proteins
119954226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
119954226
NCBI-ProteinID:
XP_038635214
LinkDB
All DBs
Position
19:45927827..46105019
Genome browser
AA seq
789 aa
AA seq
DB search
MGTHSLGAGQIALLAALCITAVRGNNKCQSRGAATCTECLQIDPLCAWCSQKDFGESSSL
RCDLKANLIQKGCRENATVFPQSTIRIVTNVPLSDKESSARPEDIVQFSPQNITISMRRG
ESVSFTVKVRQVEDYPVDIYYLMDLSFSMNDDLQTIGDLGTQIANELKKLTSKLQLGFGA
FVDKPLSPYMYMTTEEEIADPCHRVPTSCAPMFGYINVLKLTEEVSKFNDEVTKQKVSRN
RDTPEGGMDAILQAAVCNDDIGWRNDATHMLVFVTDADSHLALDGRLAGITRPNDGQCHL
GLDNQYNASTILDYPSLALLIEKLTENNIFLFFAVTDPVKNIYKSYSNMIPGSNVEVLSR
DSSNVLNLIVKAYQDIRSKAEMEVVNLPKELSISFDAFCGNAKFSEGSKSCSGLNIGDTV
NFTVTLEAVDCPKDGKSKTFIVKPILFKDTLEVTVNFNCDCDCENSANESITQCTNGNGT
YECGVCKCLPGRLGPKCECGESDSSATDQATCSPVKGDPICNNRGECICGQCVCHNNEFG
IISGKYCECDDFSCGRFKGKLCSGNGKCECGECRCFANWYDIYCNCTTNTDSCITAVGSV
CSRRGSCVCGKCVCQDAAYGDHCEKCPTCPDACSIKSDCVRCKVFDTGELKKNGTCHKVC
TDEIRQVKDLDTGTANGVICSYKDENGCTVHFRYEEEENGNSVLTVVKEPVCQPPVNILL
IVLCLMAAILLCGLLALLIWKLVVTLHDQREFAKFEAERASANWANANNPLYKAPTTTFT
NLTYTGNTD
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggacacacagcctgggagccgggcaaatcgctctgctggctgccctctgcatcacc
gccgtccggggtaataataagtgtcaatcacgaggagcagcaacatgtacagagtgtctg
caaatagatccattgtgtgcctggtgttcacaaaaggattttggtgaaagcagctcccta
aggtgtgacctcaaagcgaatctaattcagaagggctgccgagagaatgcgaccgtgttt
ccccagagcaccatccgaattgtgacgaatgtgcccctcagcgacaaagagtcgagtgcc
agaccagaggatattgtgcaattctctcctcaaaatataactatcagcatgcgtcgaggt
gagtccgtatcattcacagtaaaagtgcgtcaggtggaggactatcctgtggatatctac
tacttgatggacctctcgttctctatgaatgatgatctgcaaaccatcggggaccttggc
acacagatagccaatgaactgaagaaactgaccagcaaactccagctgggctttggagct
tttgtggacaagcccctttctccatacatgtatatgacaacagaagaggaaattgcagac
ccctgtcatagggttcctacatcatgtgcaccgatgtttggatatataaatgtgctcaaa
ctgacagaagaagtgagcaagtttaatgacgaagtaaccaaacagaaggtctcaagaaac
cgcgacacgccggaagggggaatggatgccatacttcaggctgcagtgtgcaatgatgac
atcggttggcgtaacgatgccacacacatgttggtctttgtcactgacgccgactcgcac
ttggcactggacgggaggctggccggaatcactcgccccaatgatgggcagtgccaccta
ggtctggacaaccagtacaacgcctccaccatcttggattatccatcacttgcgttgctg
attgaaaaacttacagagaacaacatcttcctgttctttgcagtaactgacccggtgaaa
aatatatacaagagttacagtaatatgattcctggctctaacgtcgaggttctctctcgg
gactccagcaatgtcttgaatctcatcgtgaaggcttatcaggacatccgctctaaggca
gaaatggaggttgtgaatctgccaaaggaattgtcaatatccttcgatgctttttgtggg
aatgctaaattctcagaaggaagtaaatcctgctcaggactgaatattggagacacggta
aactttacagtaacactcgaggctgtcgactgtccgaaggatgggaaatctaagacattc
atagtgaagcccattctgtttaaggatacactggaggtgaccgtcaatttcaactgtgat
tgcgactgtgaaaacagcgcaaatgaaagtatcactcagtgcaccaatggtaatgggacc
tatgagtgcggagtttgcaaatgtctcccaggccgtcttggacctaaatgtgagtgtgga
gagagcgattcctcagcgactgaccaggccacctgctccccagtgaaaggcgaccccatt
tgcaataaccgtggcgaatgcatttgtggacagtgcgtctgccacaataatgaatttggg
atcatatctggcaagtactgcgaatgcgatgacttttcatgtggacgtttcaaggggaag
ctgtgctcagggaatggcaagtgcgagtgcggggaatgtaggtgctttgcaaattggtac
gacatttactgcaactgcaccaccaacaccgacagctgcatcacggccgttggatcggtc
tgcagcaggcgagggagctgcgtgtgtgggaagtgtgtttgccaggatgcagcatatgga
gaccactgtgagaaatgccccacctgccctgacgcctgctccataaaaagtgactgtgtc
agatgtaaggtttttgacactggggagctgaagaagaacggcacatgtcataaggtgtgc
acagatgagattcgacaggtgaaggatctggacacaggaactgccaatggcgtcatctgt
agctataaagacgagaatggctgtactgttcatttccgttatgaggaagaggaaaatgga
aattctgtcctgacagttgttaaagaaccagtatgccagccaccagtgaacatcctgctc
attgtcctgtgtttgatggcggccatcttactatgcggcctgctggccctgctgatttgg
aagctggtggtcacactccatgaccaacgagagtttgcgaagtttgaggcggagcgggcc
agtgcaaattgggccaatgccaacaacccactgtacaaggcgccaactacaacttttaca
aatttaacctacactggcaacacagactga
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