Scyliorhinus canicula (smaller spotted catshark): 119956584
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Entry
119956584 CDS
T11175
Name
(RefSeq) platelet-derived growth factor subunit A-like
KO
K17386
platelet-derived growth factor subunit B
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
scau04510
Focal adhesion
scau04518
Integrin signaling
scau04540
Gap junction
scau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119956584
04020 Calcium signaling pathway
119956584
09133 Signaling molecules and interaction
04518 Integrin signaling
119956584
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119956584
04540 Gap junction
119956584
09142 Cell motility
04810 Regulation of actin cytoskeleton
119956584
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119956584
00536 Glycosaminoglycan binding proteins [BR:
scau00536
]
119956584
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Growth factors (RTK binding)
119956584
Glycosaminoglycan binding proteins [BR:
scau00536
]
Heparan sulfate / Heparin
Growth factors/receptors
119956584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
DUF702
Pico_P2A
Motif
Other DBs
NCBI-GeneID:
119956584
NCBI-ProteinID:
XP_038639834
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Position
23:17927258..17941616
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AA seq
210 aa
AA seq
DB search
MHLEIALFTLCYLWPVTEGDRISSEYSSFQSLPQHRSRDGENSENLYSVSVTGEGHWRSL
RVTRSPVVEDAKPAECTVRPAVMEITRSMVDPTATNFIVWPSCVEVQRCSGCCNTRNYKC
QATKVHERHVQVIKRVYRRRRLVTRKAVLVLMDHVECKCMTAAQYADSREREGSLVTAAP
TVFRARKQNSGKRKYQKFKHISGGKGVSQT
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggagatcgcactgttcacactctgctacctgtggccggtcactgagggtgac
cggatctcttctgagtacagcagcttccagagcctcccccagcatcgatcccgagatggt
gaaaattctgagaatctttattccgtgtcagtaactggagagggtcactggcgatctctc
cgtgtgacccgcagcccagtggtggaagatgctaagcctgccgagtgtacggtgaggcca
gcagtaatggaaattacacgcagtatggtggatcctaccgccaccaacttcattgtgtgg
ccgtcctgtgtggaggtacagcgatgttcaggttgctgcaacaccagaaactataagtgt
caggcaaccaaggtacacgaacgacacgtacaggtcataaaaagggtgtatcgccgcaga
cgccttgtaaccaggaaagccgtgctggtcttgatggaccacgtggaatgcaagtgcatg
actgcagctcaatacgcagactcccgggagagagaggggtccttggtgactgcagctccc
accgtgttccgggctcgcaagcagaacagcggcaaacggaaatatcagaagttcaagcac
atcagtggagggaagggcgtctcccaaacatag
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