Scyliorhinus canicula (smaller spotted catshark): 119957091
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Entry
119957091 CDS
T11175
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119957091 (cacna1ab)
04020 Calcium signaling pathway
119957091 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119957091 (cacna1ab)
Ion channels [BR:
scau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119957091 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119957091
NCBI-ProteinID:
XP_038640696
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All DBs
Position
25:3543652..4160724
Genome browser
AA seq
2610 aa
AA seq
DB search
MDSSSSYTRLWADRLMNANTNSWTDPRKHPQTPLLDTSPSSPPSYYEAVCDVKGEVGTDS
AIHCSPGALYEAQYYQMTESGLAAPYRRRGGLVDHRDVIKAHEAHKMHSTPQAKRKEWEM
ARFGDEVPARYGAGPGGAGRGGSRQGGPPGAPQRMYKQSMAQRARTMALYNPIPVRQNCL
TVNRSLFLFSEDNFVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDDDKTPMSER
LDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNIMDFVVVLTGIVATTGAEFDLR
TLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLEFYMGKF
HKACFDSNNEIVGESPCGTDYPARICLNGSNCTEYWQGPNYGITQFDNILFAVLTVFQCI
TMEGWTDLLYDSNDALGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRA
FLKLRRQQQIERELNGYLEWICKAEEVILAEEETDTEEKSPFDAMRRGTIKKSKTDLLNP
EEGEDHLADISSVGSPFTRASIKSAKLDGSSFFRKKERRFRFFVRRIVKTQAFYWTVLSL
VALNTLCVAIVHYKQPDWLSDFLYYAEFIFLALFMSEMFIKMYGLGTRPYFHSSFNCFDC
AVIIGSIFEVFWAAVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLSSMKSIIS
LLFLLFLFIVVFALLGMQLFGGQFNFESGTPSTNFDTFPAAIMTVFQILTGEDWNVVMYD
GIESQGGVNRGMISSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQ
KLALQKAKEVAEVSPLSAANLSIAATERVRPPSPRTSVYYHDACTQMKDQQKNQKHGKTV
WEQRMNEMRKQNLMTSREAIYNELDPDERWKMAYSMNIRRDMKTHLDRPLVVDPQENRNN
NTNKTRPSEPSADQRSSQQRAEEFLRKQTRYHERANDPNKERTSEREVGVLEQGDRPRRY
RSNSKEGESNRDVPRDVEYRARDREGNHEKSTRDGDGERNRTNESHRRHQHRPGVSKEGR
SASPRPEGDRERRHRPHRRNAESHDISGVEEGVKSERRSKHREGPRGSKEGKGGGENENP
DGPEKRRRSRHAQSTYDNDAKKERDDKDPMAKERRHKRKKESQGNAPPASGGPALSTTRP
VQQDMNRQNGQQTEDIDNLRNSKLATQPPNPRNTNNPRDVTNPANSCNPVNLHNPGKIGN
HTNPHNPSNPSNPHNTANRKAPTTTPGNPTNPGNPENSLILTNPTNPTNPNNPAKNTKKP
EHTTINIPFADPTLQVNKNANTDALPKKEEEKKEEEEGDDDGDGPKPMPPYSSMFILSTT
NPLRRACHYIVNLRYFEMCILMVITMSSIALAAEDPVEPNATRNNVLRYFDYVFTGVFTF
EMVIKMIDLGLVLHQGAYFRDLWNILDFIVVSGALVAFAFTKPPSPELGSDQESSEMSLM
GGSKGKDLNTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIF
AVVAVQLFKGRFFYCTDESKEFERDCRGQYLVYMRESDIKAQKREWKRYEFHYDNVLWAL
LTLFTVSTGEGWPDVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALI
IITFQEQGDKMMEDYSLEKNERACIDFAISAKPLTRHMPQNKQTFQYKMWQFVVSPPFEY
TIMAMIALNTVVLMMKFSGQPQSYDDVLKYLNMVFTILFSCECILKIIAFGILNYFQDAW
NVFDFVTVLGSVTDILVTEFWKNIINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFK
ALPYVCLLIAMLFFIYAIIGMQVFGNIAIEDNEDSDINHHNNFRTFFQALMLLFRSATGE
AWHSIMLSCLSGKPCDTKSGIKEPECGNELAYFYFVSFIFLCSFLMLNLFVAVIMDNFEY
LTRDSSILGPHHLDEYVRVWAEYDPAARGRISYTDMYEMLRHMSPPLGLGKKCPARVAYK
RLLRMDLPVADDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDRELRKEMMSIWPNLSQ
KTIDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQLLREEQNRTPLLFQRMEPPSP
TQEMDPGQNALPDPQLISGNGLAQDGIMKESQSWVTDRAQKMFQKTGAWSPERGHSEEIE
DTQPNSQAVEMQEMGRDGYSDSDHYLPMEGQSRAASMPRLPAENQTIEDTSPIRRSASTL
GHQRSKGMRLDDYSLERVIPEESQRPHRRRERGHRTSERSLSRYTDADTGLGTDLSTTTQ
SGDLPPKEKDRERGRPKDRKHHHHHHHHTSSDKERYSQERHEYSRPRSRDRRWSRSPSAG
RECVPHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPSTPRPHVTYSPVVRKAMNTSQQ
GRIPTPVPRRYSPPPPEHQRGERQSSTMERSTIPRNESPRLNRQSSSRWSTPSSHVSEPY
LGSHNDDYYCSPDYDVPSEDTLTFEAAIATSSGRSPRTSRVTSSSVSPSRHGRRVPNGYY
HNLGVTKTKGPGTRKGMHEPYSETDEDDWC
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atggattccagctcttcatataccaggctctgggcagacagattgatgaacgcaaacaca
aattcatggacggaccctcgcaagcatcctcaaacacctctccttgataccagcccatca
tcccctccgagctattatgaagcggtctgtgatgtgaaaggagaagtgggcaccgattcc
gccatccattgtagtcctggtgctttatatgaagctcagtattaccagatgacggagagt
gggctggccgctccctacagaaggcggggaggcctagtagatcacagggatgttatcaag
gcacatgaagctcataaaatgcacagtactcctcaggcaaagagaaaagaatgggaaatg
gcgagatttggagacgaagtgccggccaggtatggagccggtccaggaggcgcaggacgc
ggcggcagccgccagggcggaccgccgggggctcctcagaggatgtacaagcagtcgatg
gctcaaagggcccggaccatggctctctacaaccccatcccagtccgacaaaactgcttg
acagttaaccgatctctctttctcttcagtgaagacaactttgtaagaaaatatgccaaa
aagatcactgaatggcctccatttgaatatatgatcttagcgacaatcatcgccaattgc
attgttttagcactggagcaacacttacccgatgatgacaagacgcccatgtccgaacga
ctggatgacacggaaccatatttcattggaatcttttgctttgaggcaggaattaaaata
attgctctaggatttgcgtttcacaaaggttcttacttgcggaacggctggaacatcatg
gattttgttgtggtcctgactggtattgttgctacaacgggtgcagaatttgatcttcga
actctgcgtgcagttcgggtcctccgaccgttgaagttggtctctggaattccaagttta
caagtcgtgctcaagtccatcatgaaggcaatgatccccctgcttcagattgggctgcta
ctattttttgccattctcatgttcgctatcattggattagaattttacatgggcaaattt
cataaagcgtgcttcgatagcaacaatgaaatagtgggcgagtctccttgtgggactgac
tatcctgctcgaatatgtctgaatggaagcaactgtacagaatactggcaaggaccaaat
tatggaattactcagtttgacaacatcctgtttgctgtgctgactgtgttccagtgcatt
accatggaaggctggactgacctattgtatgatagcaatgatgctttaggaaacacctgg
aactggctgtattttatccccctcatcattattggctccttttttatgctgaatcttgtg
cttggtgtactgtcaggggagtttgccaaagagagagagagggtggaaaacagacgtgca
ttcctaaaattgaggagacagcagcagattgagagagagctgaatggttacctggagtgg
atttgtaaagcagaggaggtgatactggcagaggaggagactgacactgaagagaaatca
ccctttgatgcaatgaggagaggaacaataaaaaagagtaaaactgatttactgaatcct
gaagaaggtgaagatcaccttgcggacatctcctccgttggatctcctttcacaagagca
agtattaaaagtgccaaacttgacggttcttcatttttccggaagaaggaaagacggttt
cggttcttcgtccgacggatagtgaaaactcaggccttttactggactgtccttagtctg
gtagcactcaacaccttgtgtgttgcaattgtacactacaaacagccagactggctctct
gatttcctctactatgcagaattcattttcttagcactctttatgtcagaaatgtttata
aaaatgtatgggcttgggactaggccttactttcattcttctttcaactgttttgattgt
gcggttattataggcagtatttttgaagtgttctgggctgctgttaagccaggtacctct
tttggcatcagtgttttacgggcactcaggttacttcgaatattcaaagttacaaagtac
tgggcttctcttcgaaacttggtcgtctccttactgagttccatgaagtctattattagc
ttattattcctattgttcctctttattgttgtatttgctcttttagggatgcaactattt
ggtggccaatttaatttcgagtctggcacaccctccaccaattttgacaccttccctgca
gcaataatgactgtatttcagattttgactggtgaagattggaatgttgtcatgtatgat
gggatagaatcacagggcggtgttaacagagggatgatttcttcagtctatttcattgtt
ctgactctctttgggaactacactctgttgaacgtattcttggccatcgccgtggacaac
ctcgccaatgcacaagaacttacaaaggatgaacaagaagaggaggaagctgccaatcag
aaacttgcactgcaaaaagccaaggaggtagcagaagtgagtccattgtcagctgccaac
ttatcaatagctgctacagagagggtaagacccccttcccctaggacctcagtttactac
catgatgcctgcactcaaatgaaagaccaacagaagaaccagaaacatggaaagacagtg
tgggagcagcgaatgaatgagatgaggaagcaaaatctgatgaccagtcgggaagccatt
tacaatgagttagaccccgatgagagatggaaaatggcctactcaatgaatattcgacgt
gacatgaaaacacacctggatcgacctttggtcgttgaccctcaggaaaacaggaacaac
aacactaacaaaaccaggccttcggaaccctcagccgatcagcgaagcagtcaacagagg
gctgaggaattcctgagaaaacagactcgttaccatgaacgagccaacgatccaaacaaa
gagaggacatccgagagggaagtgggtgtattggaacagggagacaggcccaggaggtac
cgtagtaacagtaaagaaggagaatccaatcgcgatgttccaagagatgtggaataccgc
gcaagggaccgggaaggaaaccacgagaaaagcacaagggatggtgacggtgagaggaat
cgaaccaatgagtctcaccggcggcaccaacacagaccaggagtaagcaaagaaggccga
agtgcctccccaaggcctgagggagatagagagcgcaggcacaggccacaccggcgtaat
gcagaaagccatgatatcagtggggtagaggagggtgtcaaaagcgaaaggcgttcaaag
cacagggagggtccaaggggcagcaaggaagggaaaggaggcggggaaaacgagaatcca
gatgggccggagaaacggcggaggagccgacatgctcaatccacatatgacaatgatgca
aaaaaagagagagacgacaaggatccaatggcaaaggaaaggagacacaaacggaagaaa
gaaagccaaggaaatgctcctcctgcttcaggtgggccagccctttctaccacacggcca
gtacaacaggacatgaacaggcagaatggacaacagacagaagatattgacaacctcaga
aacagcaaactggccacccaacctcccaatcccaggaataccaataaccccagggatgtc
accaatccggccaactcttgcaatcctgtcaatcttcataatccaggaaaaattggaaac
cacactaaccctcataatcccagcaacccatccaatccccacaatactgctaatcgtaag
gccccaaccactacccctggaaatcctaccaatcctggaaacccagagaacagccttatc
cttaccaatcctactaatccaaccaatcccaacaatccagcaaaaaatacgaagaaacct
gaacacacaactattaatattccgtttgcagatcctaccctgcaagttaacaaaaatgca
aacaccgacgctttgccaaaaaaggaagaagaaaagaaagaagaggaagagggggacgat
gatggcgatggaccaaagccaatgccaccctatagctccatgttcatactgagcaccacc
aatccactgcgccgagcctgccattacattgtaaatctacgctacttcgaaatgtgtatc
ctcatggtcatcacaatgagcagcattgctctggctgcggaagatcccgtcgaaccaaat
gccacaagaaataacgttttaagatattttgactatgtatttactggagtctttaccttt
gaaatggttattaagatgattgaccttggcttagttctgcatcaaggagcatacttcaga
gacctttggaatattctggatttcatcgtagtcagcggtgcactagtggcttttgccttc
acgaagccaccttcgccggagttggggtcagatcaggaatcctctgaaatgagccttatg
ggtgggagcaaagggaaagatctgaataccatcaaatctctaagagtgctccgagtgcta
cgacctcttaaaaccatcaaaagactgcctaaacttaaggccgtcttcgattgtgtggta
aactccttgaagaatgttctcaacatcctgatcgtttacatgctcttcatgtttattttt
gctgtggtcgctgtgcagctatttaagggcaggtttttctattgcactgatgaatcgaaa
gagtttgagcgggattgcaggggacagtacttggtctacatgagggaaagtgatattaag
gcacagaagcgggaatggaaacgatacgagtttcattacgataatgtgctctgggcatta
ctgactctcttcaccgtgtctactggagagggatggccagatgtactgaagcattcagta
gatgctacatatgagaaccaaggacccagccctggctatcggatggagatgtctattttt
tatgttgtctactttgttgtcttccctttcttctttgtgaacatctttgtggccttaatc
atcatcactttccaagagcagggggataaaatgatggaggactacagtctggagaaaaat
gagagagcctgcatcgattttgctatcagtgccaagcccttgacacgtcatatgccacag
aacaaacaaacatttcagtacaaaatgtggcagtttgtggtgtcaccaccatttgagtat
accatcatggccatgattgctctcaacactgtggtgctaatgatgaagttttctggtcaa
ccacagtcttacgatgatgttctaaagtatctcaatatggtgttcaccattttgttctca
tgtgaatgtatcctgaaaattattgcctttggtattctgaactattttcaagatgcttgg
aatgtatttgattttgtcacagtcctgggcagcgtcactgatatattagtgacggaattc
tggaaaaatatcatcaacctgagctttctccggctctttcgtgctgctcgacttatcaag
ctcctgaggcagggttacaccatccgtatcttgctgtggacatttgtccagtctttcaag
gcgttgccttatgtctgtctcctgatcgcaatgctgttcttcatttacgccatcattgga
atgcaggtattcgggaatattgcaattgaggataatgaagacagtgatattaatcaccac
aacaatttcagaacattcttccaagccctgatgcttctctttcggagtgcaacaggagag
gcgtggcatagtatcatgctgtcatgcttgagcggaaaaccatgtgataccaaatctggt
attaaagaaccagagtgtggcaatgagcttgcctatttctactttgtctccttcattttc
ctctgttcctttctgatgctgaacctctttgttgctgtcatcatggacaactttgagtac
ctgacgcgggactcctccatccttggacctcatcacctggatgagtacgtcagggtctgg
gctgagtatgacccagctgcccgtggccgcatcagttacactgatatgtatgagatgttg
agacacatgtctccgcccttaggcctggggaagaaatgccctgcgcgagttgcttataag
aggctcttgcgaatggatttaccggttgcagatgacaacagcgtacacttcaactctacg
ctcatggcactaattcggacagccttggacatcaaaatagcaaaaggaggagctgataaa
caccaaatggaccgagagttgaggaaggagatgatgtctatctggccgaacctctcccag
aagacaattgatctacttgtgacacctcacaaatcaactgatctcacagtggggaagatc
tatgcagctatgatgatcatggaatactatcgacaaagcaaagccaaaaagctccagcta
ctccgtgaggagcagaatcgaacgccattactatttcagcgaatggagccaccgtcacca
acgcaggagatggatccagggcagaatgccttacccgacccccagctcatctctggaaat
ggcctagcacaagatggtattatgaaggagagtcaatcttgggtcacagaccgggctcaa
aaaatgtttcagaagacaggagcttggagtcctgaaagaggtcactcggaggaaatagaa
gacacgcagccaaactctcaggctgtggagatgcaagaaatggggagggacggctactcg
gacagcgaccattacctcccgatggaaggccaaagtcgagcagcctccatgccacggctt
cctgcagaaaaccaaactattgaagatacaagtccaattaggagatcagcatccacactg
ggccatcagcgctccaaagggatgcgtctggatgactactcgctagagcgggtcatccca
gaggaatcgcaaaggccccatcgccgcagggagaggggccacaggacttctgaaaggtca
ctgagccgatacacagatgctgatacagggcttggaacagacctcagtaccacaacacag
tcaggtgacctccctccaaaggagaaggaccgtgagcgaggaagacccaaggataggaaa
catcatcatcaccaccatcaccacacatcatcagacaaggagcgctactcacaggagcga
catgagtatagcagacctcgatcgagggacaggcgatggtcgcgttctcccagtgcgggc
cgcgaatgtgtcccccatagacagggcagtagttctgtgagtgggagtccagtaccttcc
acttctggcaccagcacaccgaggcgtggacgcaggcaactcccccagactccctccaca
cctaggccgcatgtcacctactccccagtggtccgcaaggccatgaatacgtcacagcag
ggcaggataccaacccccgtgccacgcagatactcgccaccgcccccggagcatcagagg
ggggagcggcagagcagcaccatggagagaagcaccataccccgcaatgagtcccctcga
ctgaatcgccaaagcagcagccgctggtccactcccagctcccacgtatccgagccttac
ctggggtctcacaacgacgactattactgcagccctgactatgatgtgccaagtgaggat
actctgacttttgaggctgccatagcgacgagctctggaaggtcgcccaggacttctcgg
gtgacgtcatcgtccgtgtccccctcacggcacgggcgacgggtacccaatgggtattac
cacaatctcggtgtgacgaaaacgaaaggacctggcacaaggaaaggaatgcacgaaccc
tacagtgaaactgatgaggatgattggtgctag
DBGET
integrated database retrieval system
