Scyliorhinus canicula (smaller spotted catshark): 119957557
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Entry
119957557 CDS
T11175
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119957557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119957557
Membrane trafficking [BR:
scau04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119957557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
119957557
NCBI-ProteinID:
XP_038641634
LinkDB
All DBs
Position
26:complement(7524191..7564447)
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AA seq
931 aa
AA seq
DB search
MDQDSTTQLKFQMASLETHLLAPCCQPYGGQPPALPGPVSWSGLGPSSFGIASPSVNHDG
TPSTSPLYCPGALPGPSHSHNSVAPMSTSSRPCPSLCKQQQSSAFQPIHHHPPQPDAVQN
PNTLGCSFHPGVGQEISRSGPEASDAQGPQVGSLEDSGDGINPDLIPNPVQAAEEDKMWW
ESQLFRTDLRGQVPPLTTTHFTVEDQGIASPRFVRCTTYTFPCSQEMAQLSHLPLAAIVK
PLATLPEEEVPVQLVDHGEGGPIRCERCTAVMCPLMQFLDNGHSFQCPFCDAVSRVPLHY
FHPIDYSGKRADRPARAELSCGSYEFLLSEGECKHNQGQSRVGFIFMIDVSYNAVRSGLL
GLICAELKKVVQHLPREPGAEESAVRVGFITYDRVLHFYNVKESLIQPQMVVATDVADVT
VPLLDGFLVNPKESSVLINSLLDKIPLLFADSLEGDVLFGPVVQAGLEALQTAGCWGKLF
LFHTSLPTARAPGELRKRNDNTNKEQTLFQPQSSYYQTLAEQCVQQGCCVDLFLFPTQYV
DVASLGLLTLRTGGDLYYYSNFRVDRDAEQFQFDFQRDVQKVIGFNAKMKVHTRKGIRVA
NYLGSLHMENRSEVKLAAIDSDKAVVVEFKHDGKLSQEVGVHIQFELLYHTVSGHRRLRI
HNASLNCSSQLIETFRSSQAETLLNYFAKTAYRAVLDQGTKRVQDQLVTHLTRMLASYRK
HCAHSAPTRGQLVMPQFLKVLPLYLNCLRKSKVLLPGPGVSIDDRAYLRQLVMSMGIAET
NVLFYPRLLPIHGLNENQVTVPREVRCTARTLSPEGFYLLEDGLNLFLWIGMLAPAEWIQ
NVFGAPSFNAVDCGAGSLPVLDNPSSRQIRGVIHAVRKQRARFLKLLVVKQADGTEGQFR
QLLVEDKSPSGGASYPDFLHHVHLSIQQSLR
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggacagcacgacccagctaaagtttcaaatggccagcttggagacccatctg
ttagcaccgtgctgccagccatatggtggtcagcctccagcccttccaggcccagtcagc
tggtcaggtttggggccttccagttttggcatcgcgtctccttctgttaatcacgatggg
acaccaagtacttcgcccctgtactgtcccggcgctcttccgggcccttcccactcgcac
aacagtgtggctcccatgtctacctccagccggccttgtccgtcgctatgcaagcagcaa
cagagttcagccttccagccaattcaccaccacccaccacaaccggacgccgttcaaaac
ccaaacacactcggctgctctttccacccaggagtcgggcaggagatcagtcgttctggt
cctgaagcctcagacgcacaaggcccacaggttggatcgctcgaggactcgggagatggg
atcaatccggatttaattcccaacccggttcaggcggcagaggaggacaagatgtggtgg
gaatcccagctattccgcacggacttgagagggcaagtacccccactgaccacaacgcat
ttcaccgtggaggatcaaggtattgcaagtcccaggttcgtccgatgcacaacgtacacc
ttcccttgttctcaggagatggctcaactatcccatcttcctctggccgccattgttaag
ccactcgctacactaccagaggaagaggttcccgtgcagctggtggaccacggagagggg
ggcccgatccggtgcgagagatgtaccgctgtcatgtgcccgttgatgcagttcttggac
aacgggcacagtttccaatgcccgttctgcgacgccgtttcccgggttccactgcactac
tttcacccaatcgattacagcgggaagcgagcagatcgtcccgcgagggcggaactatcc
tgcggctcctacgagttcctgctgtcagagggggaatgcaagcacaatcaaggccagagt
cgtgttggatttatttttatgatcgatgtttcctacaatgcagtgaggagcgggttactt
gggctgatctgcgctgagctgaagaaggtggttcagcacttacccagggagcctggggcg
gaggagtcggcggtgagagtggggttcatcacttacgacagggtgctccatttctacaac
gtgaaggagtcgctgattcagccgcagatggtggttgcgacagacgtcgccgacgtcacc
gtgccgttgctcgatggctttttggtcaacccaaaggaatcgagtgtcctgatcaacagt
ttactggacaagatcccgttgttgtttgcggacagtctcgagggggacgttctctttggc
ccagtcgtccaggcaggcctggaggcgctgcagactgccggatgctggggcaaactcttc
ctattccacacatccctgccgaccgccagggctccgggggagctgaggaagcgcaacgac
aacaccaacaaggaacagactctctttcagccacagagcagctactatcagacgttggcc
gagcagtgcgtgcagcaaggttgctgtgtggacctgttcctcttccccactcagtatgtg
gacgtggcctctctgggactgctgacgttaaggactggaggagacctctactactacagc
aacttcagggttgacagagatgcagagcagttccagtttgactttcagagggacgtgcaa
aaggtgatagggttcaacgccaagatgaaggttcacactaggaaaggcatcagagtggcc
aattatttgggttccttgcacatggagaacaggagtgaggtgaaactggctgcgatcgac
agcgacaaggccgtggtggtggagttcaaacacgacggcaaactgagccaggaggttggc
gtccacatccagtttgagctcttgtaccacacggtcagcgggcatcgaagactccggatc
cacaacgccagtctgaactgctccagccagctgatcgagacattcaggagctcgcaggcc
gaaacactgttgaactactttgccaagactgcgtatcgcgccgtgctggaccaaggcaca
aagagggtgcaagaccagctggtgacccacctgacccggatgttagcctcttaccggaag
cactgtgcccattccgcgcccaccaggggccagctggtgatgccacagttcctgaaagtc
ttacccctctacttgaactgcctgagaaagagcaaggtcctgctgccggggcccggcgtc
tccatcgacgaccgggcctacctcaggcagctcgtcatgtcgatgggcatcgcggaaacc
aacgtcttgttctatccccgccttctacccatccacgggttgaatgagaaccaggtgact
gtgccgagggaggtgcgatgcacagcccgcacactgtcgcccgagggattctacctcctg
gaggacggactgaaccttttcctctggattgggatgttggcaccggccgagtggattcag
aacgtctttggggcgccctctttcaacgccgtggattgtggagcggggtctcttcccgtg
ttggacaacccttcctcccggcaaatcagaggcgtgatccacgccgtccggaagcagcgg
gccaggttcctgaagctgctcgtcgtcaagcaggcagacggcacggagggccaattcagg
cagctgctggtcgaagacaagagccccagtgggggggcctcttacccagacttcctccat
cacgttcacctcagcattcagcagtccctgcgatag
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