Scyliorhinus canicula (smaller spotted catshark): 119963190
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Entry
119963190 CDS
T11175
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119963190 (znf827)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119963190 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_16
zf-H2C2_2
zf-H2C2_5
zf-C2H2_4
zf-C2H2_6
zf-C2H2_ZNF462
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
119963190
NCBI-ProteinID:
XP_038647854
LinkDB
All DBs
Position
3:192695319..192893183
Genome browser
AA seq
1355 aa
AA seq
DB search
MPRRKQEQPKRLPYSHGNEDEAGGELGEEENWFENASETPSEISYLDVQEDLNISPGDKL
QEQATSPESSLGSTTPIRNSLELIVSENGRFKDNLGKQDALSPVPSPLLHEMGSHVLHKP
MSSNLRRLLEAGPIRADPGLGATEKNDAAVGLGSAVPLSPSSPHALQLTALARKLAAKQE
QSNHCSPSNNFMWNQDIWLLNSSSCSLSPVSATQKLKAAANAVRLDKSLTREEEPVRYSP
YTSPYSPIQKQSASSALAALSKKVSERSLSSAQDHKRPGITFLSLASMTSSAALLKEVAA
RAAGNMLVERKDQLIPGDTLQSFEVKQEKLIPTVPVEMLLPTSKQKILKSTNKVPEEDGG
KSFQCPICGLIIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKQVHQHQDRG
ETFHCELCPFTSSRHFSLKLHMRCHQHFPRTEVKVKEAITESEVRRILSNEAADKKKKGT
ELLENTLKIQDHLLYEMTENYKETAIPLKPVKEEPSDVNLTSVSLPDSHEFGKRPEAIQQ
GTNPSEPSDLTATQKVFPFSQDISATDFLLKLSAGNQRGTLTSKFKAKDEPEERSTPPDP
ILSPQSGYLFESPAMQMPPEKSKKMSEVTAASELFSQDMSCKVASELLFKLSAENKKHFE
TQIVAIKEEPMEVKTPEPTASPFSSHVFNCKAVKNESSQNSPEIIPLTEIQLFTQDISVK
MASELLYQLSAKVSKAQEEAKEMSNLGSNSSSLCEEAFRQSPFTSNMRNPLSDLHGGPRS
QEAGKLTVESGTITPPWKFCEQLFPCKVCGKVFGRQQTLSRHLSLHTEERRYKCHLCPYA
AKCRANLNQHLTIHSVKLVSGDSEDIATAVIASCDRKSCPYYYSCHVCGFETEVNLQFVS
HMSLHVDKEQWMFSLCCSICNFSCMDETEMKTHVDVAHTDEQVQVPSCLSPISDSKAVPT
FSSSSSSSSLSSSSALCDSITESEIHNSDFTKEEQTTSFNSPVAFSGSSTSASEEKPEKG
FECIFCNFVCKTKMMYERHLQIHLITRMYECDICHKFLKTPEQLVEHKKCHNVSTGGLKC
PFCIYATNRPSAMECHLRTHYKMEFKCRICQVVKVNQLELEMHIREHRLGNHYKCDQCGY
LSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKKLKHSPRQTLCCDECFFTTT
HPFVFSRHVKKHQNGEYPEEEKKGRMQPVTLKESSSVLNSRNPRNLLSPFSVMSASQALQ
TVALSVTGNNGISTGSALGLFGLNGISAHLGKYRNCDLTHLIPLTTLFPQNKCEATFHSS
QQQSAPPDTVSPKHSFLAYLGLTEQANTVYASTKD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggagaaagcaggagcagccgaagcgcctgccttattcgcatggaaatgaagac
gaagcaggaggagaactgggtgaagaggaaaattggtttgaaaatgcctctgaaacgccg
tctgaaatctcctatttagatgtacaagaagaccttaatatatctcccggggacaaactg
caagaacaagcgacctctccagaaagctccttggggagcacaactcccataaggaactcc
ttggaattgatagtttctgaaaatggtcgattcaaagacaacttgggaaaacaggacgca
ttgtcacctgttccatcaccgcttctccatgaaatggggtcccatgtattacataaaccc
atgagtagcaatttgagacgtctgttggaggctgggccaatccgtgccgaccctggcctg
ggagctacagaaaaaaacgatgctgcagttggtcttggttcagctgtgcctttgtcacca
tcttcccctcatgcactacaactaactgctcttgctcggaagttagctgctaagcaggag
caaagtaatcattgtagtccaagtaacaactttatgtggaatcaggatatttggctgcta
aattcatcatcttgtagtttatcacctgtttcagctacacaaaagcttaaggctgctgca
aatgcagttcgtctagacaaaagtctgaccagggaagaggagccagtgagatatagccca
tacacttcgccttatagccctatacaaaagcagtctgctagttcagcgctggctgctctc
tcaaagaaagttagtgaaagaagcctgtcttctgctcaagatcataagcgtccaggaatt
actttcctttctctggcctcaatgacctcatcagcagccctactgaaagaagttgcagct
agggctgctgggaatatgttggttgagaggaaagatcaactcatcccaggagatacctta
caatcttttgaagtgaaacaagaaaaactgattccaacagttccagttgaaatgctattg
ccaacatccaaacagaagattctgaaatctaccaataaagttcctgaggaagatggagga
aaatccttccagtgtccaatttgtggtctgattataaaacgcaaaagctactggaagcgc
cacatggtgattcacacagggttaaaaagccaccagtgtccactctgtccattccgctgt
gcacgcaaggacaatctgaaatcacatatgaagcaggttcatcagcaccaggacagagga
gaaacgttccactgtgagctttgccctttcacctcgtctcgtcatttcagtttaaaactc
cacatgcgctgtcatcagcactttcccagaacagaggtgaaggtcaaagaagcgattact
gaatctgaggtcagaaggatactttctaatgaggctgctgataagaagaaaaagggtaca
gaattacttgagaatacattaaaaattcaggaccatcttttgtatgaaatgacagaaaat
tacaaggaaactgctattccactgaaaccagttaaggaggaacccagtgatgtgaatctc
accagtgtgtcactaccagatagtcatgagtttggcaaaagaccagaagcaatacagcag
ggtacaaatccatcagaaccatctgaccttacagccacccaaaaagtgtttcccttcagc
caagacatttctgcaacagattttcttctgaagctatcagctggaaaccaaaggggaact
ttaacttcaaaatttaaagctaaggatgagcctgaagagagatcaacaccgcctgatcct
attctatcacctcaatctggctacctatttgagtccccagcaatgcagatgcctcctgag
aaatcaaagaagatgtctgaagttactgctgcctccgaactgttcagccaggatatgtct
tgtaaggtggcgtcagagctgctgtttaaactgtcagctgaaaataaaaagcacttcgaa
acacagatagttgcaattaaagaagagccaatggaggtgaaaacacccgaacctacggcc
tctccgttttctagtcatgtgttcaactgcaaagcagtgaaaaatgaaagttcacagaat
tcccctgaaattatacctcttacagaaattcaacttttcactcaagacatatccgtgaaa
atggcatcagaacttctttatcagctctcagcaaaagtaagcaaagcacaagaagaagct
aaagaaatgtcaaatttgggtagtaacagctcttctctctgcgaagaagcgtttcgacaa
tcaccgttcacttcaaacatgagaaatcctttatctgatctccatgggggaccaagatca
caagaagcaggaaaattaactgtcgagtcagggactattaccccaccgtggaaattttgt
gagcagctttttccctgtaaggtttgtgggaaagtttttggccgacagcagacactatct
cgacacctttctttgcatacagaagaacgaagatacaagtgtcacttgtgtccatatgct
gccaaatgtcgagcgaacttaaaccagcatttgacaatccattcagtgaagttagtgagt
ggcgattccgaggacatagctactgcggtaatcgcaagttgcgatcgtaagagctgccca
tattactatagctgccatgtttgtggatttgagacggaggtaaacctgcagtttgtcagc
cacatgtcattacatgtagataaggaacagtggatgttttcattatgctgcagtatctgt
aacttttcctgtatggatgaaactgaaatgaagacacatgtagatgtggcacacacagat
gaacaagttcaagtgccctcttgtcttagccccatcagtgattccaaggcagtaccaaca
ttttcctcttcatcgtcatcatcctcgttatcttcatcttcagcactttgtgattctatt
actgaatctgaaattcataattctgacttcaccaaagaggagcaaaccacttccttcaac
tctccagtggcattcagtgggtcatccacatcagcttctgaggaaaagcctgagaaaggt
tttgagtgcatcttctgtaactttgtgtgtaaaacaaagatgatgtatgaacgacatcta
cagatccacctcattaccaggatgtatgagtgtgacatctgtcacaaatttttgaaaacg
ccagagcaacttgtggagcacaaaaaatgccataacgtatctactggaggactcaagtgc
ccattctgcatttatgccacaaatcgtccttcagccatggaatgccatttaaggacacac
tacaaaatggaattcaagtgtcgaatctgtcaagtggtgaaagtgaatcaactagagtta
gagatgcacattcgtgaacatcgccttggcaaccactacaagtgcgatcagtgtggctat
ctctccaagacggccaataagctgatagagcatgttcgtgttcacacaggggagcgccct
tttcattgtgaccagtgcagttacagctgcaagcgcaaagacaatctaaatctacacaaa
aagctgaagcactctcctcgacagactctgtgctgtgacgaatgctttttcacaaccacc
catccatttgttttcagccgccatgtgaagaaacatcagaatggtgaatatccggaagag
gaaaagaaagggagaatgcagcctgtaactttgaaagaaagtagctctgtcttaaacagc
agaaatcccagaaacctcctttcaccattttctgttatgtcagcatcgcaggctttgcag
actgttgcactgtcagtgactggcaacaatgggatttcaaccggatcagcacttggttta
tttggcttgaatggtatttctgcacacctaggtaaatacaggaactgtgacctcacacac
cttattccactgactacactttttccacaaaataaatgtgaagctacattccattcgtct
cagcagcaaagtgcacccccagatactgtttcccccaaacactcattcttggcctatctt
ggcctaactgaacaggcaaacacagtttatgcttcaacaaaggattga
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