Scyliorhinus canicula (smaller spotted catshark): 119963321
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Entry
119963321 CDS
T11175
Symbol
gria2b
Name
(RefSeq) glutamate receptor 2b isoform X1
KO
K05198
glutamate receptor 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119963321 (gria2b)
04082 Neuroactive ligand signaling
119963321 (gria2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119963321 (gria2b)
Ion channels [BR:
scau04040
]
Ligand-gated channels
Glutamate (ionotropic)
119963321 (gria2b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ParM_N
PWI
Motif
Other DBs
NCBI-GeneID:
119963321
NCBI-ProteinID:
XP_038648224
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Position
3:223878779..224059475
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AA seq
885 aa
AA seq
DB search
MQKIMQHIFVFLASCFCGLAFGASNPTSVQIGGLFPRGADQEYSAFRLGIFQHNSHELRL
TPHVDNLEVANSFAITNAFCSQFSRGVYAIFGFYDKKSVNTLTSFCGTLHVSFITPSFPA
DGLHQFVIQMRPDLKGALLSLIEYYQWDKFAYLYDSDRGLSVLQAVLDAAAENKWQVTAI
NVGNIKDERKDEAYRSLFQDLENKKERQVILDCERDKVNDIMEQVITIGKHVKGYHYIFA
NLGFTDGDLSKIQYGGANVSGFQIVDYDDPVVMKFMQRWLALDEKEYPGGKTSKIKYTSA
LTYDAVQVMTEAFRYLRKQRIDISRRGSTGDCLANPAVPWGQGIEIERALKLVRLDGLTG
NIQFDQFGRRVNYTVNIMELKNSGPRKIGYWNEVDKMVVTATDFLGGNETAGMENKTVVV
TSIMESPYVMLKKNYEQFEGNDQYEGYCVDLAAEIAKHCGFKYKLSIVPDGKYGARDGET
KVWNGMVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGRETQSNDQTNEFGIFNSL
WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE
DLAKQTDIAYGTLDAGSTKEFFRRSKIALFEKMWAYMKSAEPSVFVKTTAEGVVRVRKSK
GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG
LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEFCYK
SRAEAKRMKVAKNAQAINPTSSQNSQNFATYKEGYNVYGIESVKI
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagattatgcagcatatattcgtcttcctggcttcttgcttttgcggactggcg
ttcggtgcctcgaatcccaccagtgtacaaataggagggctattcccaagaggagcagat
caggaatacagcgcgtttcgtttgggaatttttcagcataattcgcacgaattgagattg
acgccccatgttgacaatctggaggtggcgaacagcttcgccataaccaatgcattctgt
tcccagttttcaagaggagtctacgccatttttggattttacgacaagaagtctgtaaat
acacttacgtcattctgtggaaccctgcatgtttctttcatcacgccaagctttcctgca
gatggcttgcaccaatttgtcatacagatgaggccggatcttaagggcgctcttcttagt
ttgatcgaatattatcaatgggacaagtttgcttacctgtatgacagtgacagaggatta
tcagtcttacaagcagtcctggatgctgctgctgaaaacaaatggcaagtcacagcaatc
aacgtcggaaatataaaagatgagaggaaagatgaagcctatcgctcactctttcaggac
ctggaaaataaaaaggaaagacaagtgattctcgactgcgagcgtgacaaagttaatgac
atcatggaacaggtcataacgattgggaagcacgttaaaggatatcattacatctttgct
aacctgggctttacagatggagatttgtcaaaaattcaatatggtggagcaaatgtgtct
ggatttcaaattgttgattatgatgatccagttgttatgaagtttatgcagcgatggtta
gcactcgatgagaaggaatatccaggagggaaaacaagcaaaattaagtatacttctgct
ctgacctatgatgctgttcaagtgatgaccgaagcattccgctatctacgcaaacaacgg
attgacatctccaggagaggaagcactggagattgtcttgctaaccctgctgtaccctgg
ggacagggcatagaaatagaaagagcattaaaattggtccgtcttgatggtttaactgga
aatattcagtttgatcaatttggaagaagagtgaattatacagttaacatcatggaactc
aaaaatagcggtccccggaagattggatactggaacgaagtcgacaagatggttgtcaca
gctacagactttcttggtggaaatgagactgcaggaatggagaataaaaccgttgtcgta
acaagtattatggaatcgccctatgttatgctgaagaagaattatgagcaatttgaagga
aacgaccaatatgaaggttattgtgttgatctagctgctgaaatagccaaacattgtggc
tttaagtacaaactttccatagtgcccgatgggaagtacggcgctcgggatggggaaaca
aaagtttggaacggaatggtgggagagctggtttatgggaaggcagatattgcagtagct
ccactgacaataacattggtaagagaagaggtgatcgacttttcaaaacccttcatgagc
cttgggatatccatcatgataaagaagcctcagaagtcgaagccaggagtattttccttt
ctagatccattagcctatgaaatctggatgtgcattgtcttcgcttacatcggggtcagc
gtagttttattcctggtcagcagatttagtccatatgagtggcacaccgaagaatatgaa
gatggacgtgaaacacaaagtaacgaccaaactaatgaatttgggatatttaatagtctc
tggttttctctgggtgcctttatgcagcaaggatgcgatatttcgccaagatccctgtcg
gggcgaattgttggaggtgtgtggtggttctttaccttgatcataatatcatcatacacg
gctaacttagctgctttcctgacggtcgaacgaatggtgtctcccattgaaagtgcagag
gatcttgcgaagcaaacagatattgcatatggaactttggatgctggatccacgaaagaa
ttctttaggagatccaaaattgcgctctttgaaaaaatgtgggcctatatgaagagtgcc
gagccatcggtctttgtgaaaaccacggcagaaggtgtggtgagagtacggaaatcgaaa
ggaaaatatgcctatctcctagagtccaccatgaatgagtacattgaacaaaggaaaccc
tgcgacaccatgaaggttggaggaaacctagattcaaaaggatacgggattgcaacaccc
aaaggatcctcattaagaaatgcggttaacctcgcagttctaaaactgaatgaacaaggc
ctcttggacaaattgaaaaacaaatggtggtacgacaaaggagagtgcggcagcggggga
ggtgattccaaggagaagacaagtgctttaagcctaagcaatgtggctggagtcttctac
attctcgttggaggactgggtttggcaatgctggtggctttgattgaattctgttacaag
tcaagagcagaggcaaaacgaatgaaagtggcgaagaatgcacaggccattaacccaact
tcctcgcagaattcacagaattttgcaacttataaggaaggttacaacgtatatgggatc
gaaagtgttaaaatttag
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