Scyliorhinus canicula (smaller spotted catshark): 119963331
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Entry
119963331 CDS
T11175
Symbol
rapgef2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04010
MAPK signaling pathway
scau04517
IgSF CAM signaling
scau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119963331 (rapgef2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119963331 (rapgef2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119963331 (rapgef2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RA
RasGEF_N
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119963331
NCBI-ProteinID:
XP_038648242
LinkDB
All DBs
Position
3:226264289..226826497
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AA seq
1712 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERTQQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFKKINQKGERQTIIDTVDPYPMGKPPLPRGYHTLPADF
TKLHLADNLHPQVTHVSSSHSGCSMTSDSGSSSLSDLYQATESDMDLSGLPETAVDSEDD
DDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELC
AVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYSDGRLEILCMGNSFGVSPTLEKE
YMKGVMKTKADDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRELDRTGTRKG
HIVIKGTAERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFNDPSLRDK
VTRVVLLWVNNHFNDFEGNSAMTTFLEDFENNLEREKMGGHLRLLNIACAAKAKRRLITL
MKPSREAPLPFILLGGTEKGFGIFIDSVEPGSKATETGLKRGDQIMEVNGQNFENIQLPK
ALEILRNNTHLSITVKTNLFVFKELLSRLAEEKRNGAPHLPKIGDKKGSRYSIPDLAVDV
EQVIGLEKASKKAKANTVTGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVGLKQS
RYIAPALPVSGTLSSSNPDLLQSHHRILDFNTTPELPDQVLRVFKADQQSRYLMISRDTT
AKEVVIQALREFAVTAAPESYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKN
NMETETLCSDEDAQELLRESHITLLQLSMIEVATQLSMRNFELFRNIEPTEYIDDLFKLK
AKTECTNLKKFENIINQETFWVATEILKESNQLKRMKIIKHFIKMALHCRECKNFNSMFA
IISGLYLAPVARLRNTWEKLPNKYEKLFQDLQDLLDPSRNMAKYRNVLNNENLQPPIIPL
FPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAVMFRTRKKKWR
SLGSLSQGSTNAAVLDVVQAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQYLANLTLDMD
EESLQALSMQCEPSTNTLPKSTGEKKVGKLSDTSPVAARSGVQHQKQQQQKVNQALQVPA
VSLYPSRKKVQVKDLPPFGTHSPQALKKILSLSEEANLDRNKKQAEDTISNTSSQLSSPP
TSPQTSPRKGGSKLRSHGSRQSDLSGSSSSLGSENSNKNNNAPRTYGIGFALAPSATADN
FSDSGHSEISSRSSIVSNSSFDSVSASLHDDRRQRHSVSVLDSNLGLGIERRLEKRSAVD
PDQYCLSSYTPTSTEGKGSLYAGEAVLSSPSMEELTQDQGDRTSLDAADSGRGSWTSCSS
GSHDNIQTIQHQKSWETLSSLGNLHFETAAEGTGLTTMWTSGNQMDQTIFSERGTKFTRQ
SQARDGIDHAQSRNSWASTTGYWAEDSEGDTGTIKRRGGKDVALDSEGSSTALAPEDPKQ
NVRTSHITVSSSSAKGLIARKEGRYREPPPTPPGYVGIPIADFQEGHRHPGMKPPDYNVA
LQRSQFVARPGDPHGLSSVQSATAHTISHSQIRPLSRPQWHKPNESDPRLAHLQTQGSPS
EDDEDGTEKKKKIDKFKKEHEVESRKQRAKRR
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatgtggataacagcttcagacaggcggtcatgaagaacccggccgaaagg
acgcaacaggatttggaaattgtttattcttatcttcatggaatggaagcattgtccaat
ttgagggaacaccagctgagattaatgtgtgaaactgtcaggtatgaaagacatgaagca
aatgaagtcctatactaccctgatgatattggcacatgttggtacatactgttgtctggt
tctgtattcatcaaagagtccatgtttcttcccagaagcagttttggcaaacgatcagca
gggagtttgagacgtggctgtgaatgtattgtgttagagccttcagaaatgattgtggtg
gactacatggatgaaaatgaggaatattttcagcggcaagcttctcataggcagtctcgt
agacgatttaaaaaaattaaccagaaaggggagcggcaaacaatcatcgatactgtggat
ccttatccaatgggaaagccaccattgccacgtggatatcacacgcttcctgcagatttc
accaaattacatctcgccgataacctccatccacaggtcactcatgtttcctccagccat
tcaggatgtagcatgaccagtgactctggcagcagcagcttatctgacctttaccaggcc
acagagagtgatatggacctgagcggcctgccagagactgcagtggattctgaagatgat
gatgatgaagaggacattgagagagcatcggatccgctgatgagcagggacattgtcaga
gactgcctggaaaaagatcctatagatagaacagatgatgatattgaacaattgttggaa
ttcatgcatcagctcccagcttttgctaacatgacaatgtcagtcagaagagaactttgt
gctgtgatggtgtttgcagtggtggagcgggcaggcactatagtgctcaatgatggtgaa
gagcttgattcttggtcagtcattttaaatggttctgtagaagtcacatattctgatgga
aggctcgaaatcctgtgcatgggcaatagctttggtgtctctcctactttggagaaagaa
tacatgaaaggagtgatgaaaactaaggctgatgactgccagtttgtgtgcatagcccag
caagactattgccgaatcctcaaccaggtagaaaagaatatgcagaaagtagaggaggag
ggagagattgttatggtaaaagaacaccgagagttggatcgtacaggaaccaggaaaggg
catatagttataaagggaacagctgaaaggttaacaatgcacctggtggaagagcattct
gtggtggatcccacgtatatagaagattttcttttaacctataggaccttcttatcaagc
ccaatggaagttgggaagaaattgctggagtggtttaatgacccaagtctcagggacaag
gttacacgggtagtattactgtgggtaaacaatcacttcaatgattttgaaggaaattct
gcaatgaccacctttctagaagattttgaaaacaatttggaacgagaaaaaatgggtggt
caccttagactgttgaacatcgcttgcgcagctaaggccaagaggcggctgataacttta
atgaagccatcacgagaagcccctttgccatttatccttttgggaggcactgagaaaggt
ttcgggattttcattgacagcgtagaacctggtagtaaagcgactgaaactggtttgaaa
cgtggtgatcagataatggaagttaatgggcaaaatttcgagaatattcagctgcctaaa
gctttggaaattcttagaaacaatactcatttgtctatcactgtgaaaacaaacttgttt
gtatttaaagaacttctgtcgagactcgcagaagagaagagaaatggtgctccacattta
cccaaaatcggtgataagaaaggcagccgttactccatccctgaccttgctgttgatgtt
gaacaggtgattggattggagaaggcaagcaagaaggctaaggcaaacacagtgacagga
cggaacaaactgaagaaaatactagacaagactcgaattagcatccttccacaaaaacct
tacaatgacattggtattgggcagtcccaggatgacagcattgtagggttgaagcagtcc
aggtatattgcacctgcattacctgtaagcggcaccttatcatccagtaatcctgacctg
ttgcagtctcaccatcgcattcttgattttaacaccacaccagagctaccagatcaagtt
ttaagagttttcaaggcagaccaacaaagtcgctacttaatgatcagcagagatactact
gcaaaagaagtggtaattcaggcgcttcgagaatttgcagtgactgctgctcctgaatcg
tactcgctatgtgaagtctccgtcactcctgaaggtgttatcaaacaaagacgacttcca
gatcagctgtcgaagcttgctgaccgaattcaacttagtggcaggtactatctgaagaat
aacatggaaacagagacactgtgctcagatgaagatgcgcaggaattgcttcgggagagt
catatcacactcttacaactaagcatgattgaagttgccacccagctctccatgaggaac
tttgaactgtttcgtaatattgaacccacagagtacatcgatgacttattcaaacttaag
gcaaaaactgaatgtaccaatctgaagaagtttgagaacattatcaatcaggaaacattt
tgggttgcaacagagatccttaaagagtcaaaccaattaaaaagaatgaagataattaaa
cactttatcaagatggcactacactgtcgagaatgcaagaactttaactccatgtttgca
attatcagtggtttatatcttgcaccggtggcaagactgcggaatacttgggaaaaactt
ccaaataaatatgagaagttatttcaggaccttcaggacctcttggatccctccagaaat
atggctaaataccgcaatgttctcaacaacgagaacctgcagcctcccattattcctctc
ttcccagtgatcaagaaagatttaacattcctgcatgaagggaatgattccaaagtggaa
ggtttggtgaatttcgaaaagctacggatgattgccaaagaaatccgtcatgttggccgt
atggcttcagttaatatggatcctgctgtgatgttcagaacaaggaagaagaagtggaga
agtctggggtcgcttagccagggcagtacaaatgctgctgtgctggatgtggtacaggca
gggggacacaaaaaacgggtacgccgcagctcatttctcaatgccaagaaactctatgaa
gatgcacagatggctcggaaagtaaaacaataccttgcaaaccttactctggatatggat
gaagaaagcctgcaggcactctcaatgcagtgtgagccaagtactaatacgttacccaaa
agcacaggtgaaaagaaagtaggaaaactttcagatacatctccagtcgctgcaagatca
ggagtgcaacatcagaaacagcaacagcagaaagtaaatcaggccctccaggtcccagcc
gtctcattgtatccatcacgcaagaaagtgcaagttaaagacctccctccatttggtaca
cattctcctcaagctttgaagaaaatactgtccttgtctgaagaagcaaatttagatcgg
aataaaaagcaggcggaagatactatatcaaatacatcatctcagctatcgtctcctccc
acgtctcctcagacctcaccaaggaaaggtggcagtaagctgagatctcatggctccaga
cagtcggacctatcaggctcttcatcctctcttggaagtgaaaacagtaacaagaataac
aatgcaccacggacctatgggataggctttgcattagcaccaagtgccactgcagataat
ttttcagattctggacacagtgaaatttcttcccgctcaagcattgtcagcaattcctcc
ttcgattcagtatctgccagccttcatgatgaccgccgacagcgacattctgtcagtgtt
ttggactccaatttaggcttgggtatagaaagaagactggaaaagcgatcagcagttgac
ccagatcaatactgtttaagttcctacacaccaacaagcactgaaggcaaaggaagtctg
tatgcaggagaagcagtactgtcttcaccgagtatggaggagttaacccaggaccaggga
gaccgaacttctcttgatgcagcagacagtggtcgaggaagttggacttcttgttcaagt
ggatctcatgataacatccaaacaattcagcaccagaaaagttgggagacactcagtagt
ttggggaatcttcattttgagaccgctgctgaaggaacagggctaacaaccatgtggact
tcaggtaaccagatggaccaaaccatattctctgaacgtggcacaaaattcaccaggcag
agtcaagctagagatggcattgaccatgctcagtccagaaacagctgggcatcgacaaca
ggatactgggcagaggattctgaaggtgacacgggaactataaaacggagaggtggaaag
gatgtagcacttgactctgaaggaagcagcacagcattagctccagaagatcccaagcag
aatgttaggacttctcatataacagtatcttcatcctccgcaaaaggtctcattgcacga
aaagagggccgatatcgagaaccaccaccaacacctccagggtatgttggaattcccatt
gcagacttccaagaaggtcatcgacatccaggcatgaaacctccagattataatgtagca
ctacaacggtcacagttcgtggcaagaccaggtgatccccatggactttcatctgttcaa
agtgcaactgcacatacaatcagtcactcacagatcaggcctcttagtcgacctcagtgg
cacaaaccaaatgagtcagaccctagactagctcacctacaaacccaaggttccccatct
gaggatgatgaggatggaacagaaaaaaaaaagaaaattgacaaatttaaaaaagaacat
gaagtggaaagcagaaagcaaagagcaaaaagaagatga
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integrated database retrieval system
