Scyliorhinus canicula (smaller spotted catshark): 119965037
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Entry
119965037 CDS
T11175
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119965037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119965037
03012 Translation factors [BR:
scau03012
]
119965037
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119965037
Translation factors [BR:
scau03012
]
Eukaryotic type
Release factors
119965037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
119965037
NCBI-ProteinID:
XP_038651178
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Position
4:complement(138576028..138729274)
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AA seq
437 aa
AA seq
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MADDPTAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGTGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISSDKVNVAGLILAGSADFKTELSQSD
MFDPRLQSKVLKLVDISYGGENGFNQAIELSAEVLSSVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDIMRYVLRCHGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGDEDDFYDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacccgactgcagccgacaggaacgtggagatctggaagatcaagaaactc
atcaagagcctggaggccgccagagggaatggcaccagtatgatttcgctcatcattcct
cccaaagaccagatctcacgagtagcaaagatgttggcggatgaatttggcactgcctca
aacatcaaatcgcgagtgaaccgtttatctgtgctgggggccattacgtctgtgcaacag
cgtcttaaactatataataaagtaccgcctaatggtttggttgtctactgtggaacaatt
gtaacggaagaaggaaaagaaaagaaagttaacattgattttgagcccttcaaaccaatt
aacacatcactatacctctgtgacaataaatttcacacagaggctctcactgcgctactg
tcagatgacagcaaatttgggttcatcgtaattgacggtactggggctttgttcggtact
ctccagggaaacacacgggaggtactacacaagttcactgtggatctaccaaagaagcat
ggcagaggaggtcagtccgccttgcgttttgctcgcctgagaatggaaaagagacataac
tatgtgcggaaggtagcagagacggctgtgcagctgttcatcagcagtgacaaggtgaac
gtggcgggtctcatcttggctggttccgctgatttcaaaactgagctcagccagtctgac
atgtttgatccgcgattgcagagtaaagtgctgaaactggtggacatctcctacggaggt
gagaatggattcaatcaagcaatcgaactgtcggctgaggtcttgtcgagtgtgaagttc
attcaggaaaagaaactaataggacgatactttgatgaaatcagccaggatacagggaag
tactgcttcggagtggatgacacgctgaaagcactggagatgggtgcagttgagatcctg
atagtttatgaaaatctggatattatgcgatatgtacttcgttgtcatggcacagaagaa
gagaaaatcttgtacctgacacctgagcaagagaaggataaatcccatttcacggacaaa
gagactggacaggaacatgaactgatagaaagcatgcccctcttggagtggtttgccaac
aactacaaaaaatttggcgctacgctggaaatcgtaaccgacaagtcacaagaagggtcc
cagtttgtgaaaggctttggtgggattggtggtatcctgcggtaccgtgtggactttcaa
ggtatggaataccagggagatgaggatgacttttacgacctggacgactactag
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