Scyliorhinus canicula (smaller spotted catshark): 119967181
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Entry
119967181 CDS
T11175
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119967181
04082 Neuroactive ligand signaling
119967181
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119967181
Ion channels [BR:
scau04040
]
Ligand-gated channels
GABA-A
119967181
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119967181
NCBI-ProteinID:
XP_038655275
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Position
6:complement(61187459..61262286)
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AA seq
486 aa
AA seq
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MFNREVIRTAGFNRTIAGILQIMPYFLKTILILCCLTIAAESKKHRKKRWAPQVEHPKQG
SPILRRIPDLTKTRATKSEHLLRVDDHDFTMRPAFGGPAIPVGVDVMVESLDSISEVDMD
FTMTLYLRNYWKDERLSFPSTTNRSMTFDGRLVKKIWAPDVFFVHSKRSFIHDTTTDNIM
LRIFPDGNVLYSIRVTVTAMCNMDFSRFPLDTQTCSLEIESYAYTEDDLMLYWKDEKEAL
KTDEKVSLSQFLIQKFHTTSKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVM
LSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFL
SVLEYAAVNYLTTVQEKNERKLLQKFPCTCGIAKDLMFDGTLSEADANSLAGYTRTSIIT
DDRVKQDRMVVHLPIGGESSSQKKKRLREFVGMRIIKNTHSIDKYSRMIFPASYIFFNLV
YWSAYL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgagaagtgattcgcactgcagggtttaacaggactattgctgggattttg
caaatcatgccttattttttaaaaacgatcctaatactctgctgcctgacgatagctgct
gaaagcaagaaacacaggaagaaaagatgggcacctcaggtggaacaccccaaacagggc
agtcccatattaaggagaattccggatttgacaaaaactcgagcgacaaagtctgaacac
ctgctcagagtggatgatcatgatttcacaatgagacctgcgtttggtggcccagcaata
cctgttggagttgatgtgatggtggagagtctggacagtatttctgaggtggatatggat
ttcacaatgactctctatttgcgcaattactggaaggatgagcggctttcgtttcccagc
actactaacagaagcatgacattcgatggcaggctagtcaaaaagatttgggcacctgac
gttttttttgttcattcgaaaaggtcatttatccatgacaccaccacagataacataatg
ttacgcatctttcctgatggaaatgtgctgtatagcataagggttacagtaacagcgatg
tgcaacatggatttcagccgcttccctctcgacacgcagacctgttccctggagatagag
agctatgcttacactgaagatgaccttatgctgtattggaaggatgagaaagaagccttg
aagacagatgagaaggtctctttgtctcagtttctcatccagaaatttcacactacctct
aaattggctttctatagcagtacaggttggtacaatcgtctgtatattaacttcactctg
cgtcgccacattttcttctttttgctacaaacctacttcccagcgactctgatggtcatg
ctgtcctgggtgtcattctggattgatcggcgagctgtaccagccagagtttcactcggt
ataacgacagttctaactatgtccaccatcatcacgggtgtgaatgcttccatgccaagg
gtgtcctacattaaagccgtggacatttacctgtgggttagttttgtgtttgtctttctc
tcggtgttggagtacgcagctgtcaattacctaacgacagtgcaagagaaaaacgaaagg
aaactcctgcaaaagtttccctgcacatgtggaattgccaaggacttaatgtttgatggt
accttaagtgaagcggatgccaacagcctggctggatataccagaacttcgataattact
gatgaccgagtcaagcaggacaggatggtagttcacttacccatcggtggagaatccagt
tctcaaaaaaagaaacgccttcgggagtttgttggcatgcggatcattaagaatacccac
tcaattgataaatattccagaatgatatttccagcgtcttatatattttttaacttggta
tattggtctgcatatttatag
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