Scyliorhinus canicula (smaller spotted catshark): 119967388
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Entry
119967388 CDS
T11175
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21 isoform X1
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119967388 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
scau04050
]
119967388 (tnfrsf21)
04090 CD molecules [BR:
scau04090
]
119967388 (tnfrsf21)
Cytokine receptors [BR:
scau04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
119967388 (tnfrsf21)
CD molecules [BR:
scau04090
]
Proteins
119967388 (tnfrsf21)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
ATP-synt_8
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
119967388
NCBI-ProteinID:
XP_038655815
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Position
6:complement(109758815..109873960)
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AA seq
621 aa
AA seq
DB search
MGAFSLLWCFLPSLVAWSAATMHWSILTLLFLLLGDITAQVEPTPKAALSLSGKYRHHDR
STGKEIYCNKCPAGTHVAQHCTSSSLRVCSPCKNGTFTKHENGIDQCHTCRPCVTPMIEK
FPCTAFSDRECTCPPGTFLSNKICTVYTVCAIGWRVKKKGSETEDVKCKPCPRGTFSDVP
SSPRCKTLTNCSEQALVILEPGNRKRDNMCGLPSTALSTATNSPSTESAHHHNGVLPDAS
TPSGIPNKLSTTTTSTTTNLISGVTKEAQLWHSPQLRTNSALSASMNFQPIMESSRAGAD
SRPPRKGPPRPSAHKHFDINEHLPWMIVLFLLLVLVVTVVCSIKKSSHVLKKGPKQDPSS
IVEKAGLKKPISPTPNKEKWIYYSNGQGVDILKLVAAQIGSQWKDIYQFLANATEREVAA
FSNGYSGDHERAYAALQHWTIRDPEANLAKLISALRHYKRNDVVENIRGLMEDTSQLDLE
KLVSVLGSKNGVPPNPAVPNTTVEPSSADKTRVFFVDESEPLLRCDSTSSTSSSVLSRTG
SFISKEKKDTILRQVRLDPCDLQPIFDDTLHILNQEELGMIEDIPHAEDKLDKLFEIAGG
KSQDASQKLLDSVYSHLPDLL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggagcttttagcttgttgtggtgctttcttccctctctcgtagcttggtccgcagca
acgatgcattggagcattctgacgctgctgtttctgttgcttggtgacattacagctcaa
gtagaacccactccaaaggctgctctatctctttctggtaaataccgtcaccatgatcgt
tcaacagggaaagaaatttactgtaataagtgccctgcaggcacccatgtggcacaacat
tgcacatcatcatcattgcgtgtctgcagcccctgtaaaaacggcactttcacgaaacat
gagaatggcattgatcagtgtcacacctgcaggccctgtgtgactccaatgattgagaaa
ttcccctgtactgccttttctgaccgtgagtgcacttgcccacctggtacttttctgtct
aacaaaatctgtacagtgtatacagtttgtgcaattggttggcgcgtgaagaagaaggga
agtgagacagaagatgtcaagtgtaaaccttgccctcgtggcactttctctgatgtgcct
tccagtccgaggtgcaaaacactcaccaattgttcagaacaggctctggtgatcttggaa
ccaggaaaccgaaaaagggataacatgtgtggcttaccaagcacagctctgagcacagct
accaactcaccaagcacagagtccgctcaccaccacaatggagtactgcctgatgcctcc
actccatcaggtattcctaataaattgagcaccacgactacatctacaaccacaaattta
atcagtggagtgaccaaagaagcacagctttggcattctccccagttacgcacaaattca
gctctctcagcttcgatgaattttcagcctatcatggaatcctcgagagctggtgctgat
tccagaccacccaggaaaggcccgccaaggccaagcgcacacaagcactttgacataaat
gagcatttaccgtggatgattgttctctttctgctgttggtgctggtggtgacagtagtc
tgcagtatcaagaaaagctcccatgtgctgaagaaaggccccaaacaagaccccagcagc
attgttgaaaaagctggtctcaagaagcctatttccccgactccaaataaagaaaagtgg
atttactattctaatggacaaggtgttgacattctgaaacttgtggcagctcagattggt
agccagtggaaggacatataccagtttctcgccaatgcaactgaacgagaagtagcagct
ttctccaatgggtattcaggagatcacgaacgagcgtatgcagccttacaacattggacc
attagagatcctgaagccaatctggcgaaactcattagtgctcttcgtcactacaagcgc
aatgatgtggtggaaaacatcaggggactaatggaagatacttcccagctggatctcgag
aagcttgtctctgttctcggcagcaaaaatggcgttcctccaaatcctgccgttcccaac
acaaccgttgagccatcttcagctgacaaaacaagagtgttctttgttgatgaatcagaa
cccctccttcgctgtgactcaacttccagtacttcatcatcagttctcagcagaactgga
tctttcatttccaaagagaagaaagacaccattttacgacaggtacgtttggatccctgt
gacctgcagcctatatttgacgatacgcttcacattcttaaccaagaggagcttgggatg
atcgaggatattccacacgcggaggacaaactggacaagctcttcgagatcgcgggaggg
aagagtcaggacgccagccagaaactcctggactctgtttatagccacttacctgacctc
ctttaa
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