Scyliorhinus canicula (smaller spotted catshark): 119969029
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Entry
119969029 CDS
T11175
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3-like isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119969029
04082 Neuroactive ligand signaling
119969029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119969029
Ion channels [BR:
scau04040
]
Ligand-gated channels
GABA-A
119969029
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
119969029
NCBI-ProteinID:
XP_038658086
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Position
7:62360146..62403828
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AA seq
463 aa
AA seq
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MLFFWELLFLTLLPVAMDKGSHAKKHHQQPTTEDIKQKSRPESKRSDSTKTHLTKSEQLL
RIEDHDFAMRPGFGGTAVSVGIDVQIESIDSISEVDMDFTMTLYLRHYWKDSRLAFPSST
NRSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSLRTTVTAICS
MDFSSFPLDTQNCSLELESYAYNVKDLMLHWKNEKEPLKTDEQILLAQFFIQEFRASSGL
AFYSSTGWYNRLFINFILRRHIFFFLLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGIT
IILTMSTIITGVNASMPRVSYVKAVDIYLWVSFLFVFLSIIEYAAVNYLTTIEERKKIKQ
REKFSDSFRLTQTQNMAFDGCYHDSQLDLSDYAEAHLSVANTEGRERASCSNPDGQQLRR
KKSSKGNVTAVIIRNNHAIDTYSRVLFPAAFILFNFIYWCLFS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcttttgggagctgctgtttctcaccttgttgccggttgcaatggacaaggga
agtcatgccaaaaaacatcaccagcagcccacaactgaggatatcaagcagaaaagtcga
ccagaaagtaaaagatcagattcaaccaaaacacacttaacaaaatctgaacaactcctt
agaatagaagaccatgattttgcaatgaggcctggatttggaggaactgcagtatctgtt
ggtatagatgtccagattgaaagcattgacagtatttcggaggttgatatggactttaca
atgactttatatctaagacattactggaaagacagcagactcgctttcccaagttccacc
aacagaagtatgacatttgatggaagattagtcaagaaaatttgggttccagatgtgttt
ttcgttcactccaaaagatctttcatacatgacacaaccatggagaatatcatgctaagg
gtatacccagatggaaacatcctgtacagtctaaggacaacagtcactgcaatatgctca
atggactttagcagctttccccttgatactcagaattgttcacttgaacttgaaagctat
gcttacaatgtaaaagatttaatgctccactggaaaaatgaaaaggaaccacttaagaca
gatgagcagattttacttgctcagtttttcatccaagaattccgtgcatcaagtggactc
gcattttatagcagtactggttggtacaacagattgtttattaatttcatcctaaggagg
cacatattcttttttcttttacaaacctactttccaaccatgttaatggtcatgctatct
tgggtttccttctggattgacagaagagcagtcccagctcgggtttcactgggaataaca
attatactgacaatgtcaacaattataactggagtgaatgcatctatgcctcgagtatct
tacgttaaagctgtggatatctacctctgggtcagctttctctttgtattcctttctata
attgaatatgcggctgtgaactatctaaccactattgaagaaaggaaaaaaataaagcag
agagagaagttttcagattcctttaggttgactcagacacaaaacatggcttttgatggc
tgctaccatgatagccagctggacctgtcagactacgctgaagctcatttaagtgtagca
aatactgaaggcagagaacgtgcatcctgttcaaatccagatggtcaacagttaagaagg
aagaaatctagcaaggggaatgtcactgcagttattataaggaacaatcacgctattgat
acctactcaagggttttatttcctgcagcatttatcctttttaatttcatttactggtgc
ttattttcataa
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