Scyliorhinus canicula (smaller spotted catshark): 119971227
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Entry
119971227 CDS
T11175
Symbol
spg7
Name
(RefSeq) LOW QUALITY PROTEIN: paraplegin
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119971227 (spg7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
scau03110
]
119971227 (spg7)
Peptidases and inhibitors [BR:
scau01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
119971227 (spg7)
Chaperones and folding catalysts [BR:
scau03110
]
Other chaperones and cochaperones
AAA proteases
119971227 (spg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_17
RuvB_N
AAA_22
AAA_2
TIP49
nSTAND3
PglZ
AAA_16
Mg_chelatase
AAA_28
AAA_14
NACHT
IstB_IS21
ABC_tran
DUF7864
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
119971227
NCBI-ProteinID:
XP_038662409
LinkDB
All DBs
Position
9:33380760..33471106
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AA seq
809 aa
AA seq
DB search
MAAWIAWQRYHRSCVRNLPSVLSACSRKLVQFRAFSLNAVFQEAALGRAFACRGCDLKRT
RFDFCSSCCHQARDPILNSLLFRPFGHQFQELNRIHIFRQLKLDPTRFCQLLGGLYHFST
SKSRQDEXKQNEGSKGKSPEEDEEEKRRREREDQMYRERLRTLFIIAVIMSLLNSINSSG
GNISWNXFVQEMLAKGEVARVQVVPESDVVEIYLHPGAVVFGRPRLALMYRMQVANIDKX
EEKLRAVENELGIDGKERXPVSYKRTGFFGNALYALGMAAVGVAILWYIFRLAGMAGREG
GFSAFNQLKMARFTIVDGKSGKGVTFKDVAGLHEAKLEVREFVDYLKSPERYLQLGAKVP
KGSLLLGPPGCGKTLLAKAVASEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAP
CIVYIDEIDAVGKKRSTSMSGFANTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILD
SALMRPGRLDRHIFIDFPTLQEGNFEQHLKSLKXLVRLGFYSQRLAELAPGFSGADIXNI
CNEAALHAAREGEKSVDTLNFEYAVEKVIAGTAKKSKILSKEEQKIIAFHESGHVLVGWL
LEHTEAVLKVSIAPRTNAALGFAQILPREQYLFTKEQLFERMCMALGGRVLQSVTFNRVT
TGAQDDLRKVTRVAYSMVKSYGMVETFGHISFPDTEKXGVIGRRPFSQGLQEHMDHEVNI
LVASAYRRTEKLLLDNRDKLLAVTCNALMEKEVLNYDDIEMLIGAPPFGPKKMIPPQSWI
EAEKDKQDTGEDEPPARHVQDDEQTLNPV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctggatagcctggcagcggtatcacaggagctgtgtgagaaacctgccatcg
gtattgtctgcctgcagcagaaagcttgtgcaatttcgggcttttagtttgaacgctgtt
ttccaggaagcggccctgggacgagcctttgcctgtcgaggctgtgacttgaaaaggaca
cgttttgacttctgtagttcttgctgtcaccaagccagggatcctatattaaatagtttg
ttatttcgtccatttggccatcagttccaggaacttaataggatacacatttttaggcaa
ttgaaactggatccaactaggttctgccagttattaggtggcctataccatttcagcaca
tcaaaatcacgtcaagatgaataaaaacagaatgagggatcgaaagggaaaagtcctgag
gaagatgaagaagagaaaaggcgacgggagcgggaagatcaaatgtacagagaacgcctg
cgaacgctgtttataatagctgttattatgagcttgttgaattccattaacagcagcgga
ggaaatatctcgtggaacngatttgttcaggaaatgttggcaaagggagaagtggctcga
gtgcaagttgtaccagagagtgatgtcgtagaaatctacctccacccaggagctgtagta
tttggtagaccgcgattagccttgatgtatcgaatgcaggtagcaaacattgataagntt
gaagagaagctgcgggctgttgagaatgagctcgggattgatggaaaggagcgtnatcca
gtatcatacaagcgcactggtttctttggaaatgcactgtatgccctgggaatggcggca
gtgggagtggccattctctggtacatatttcgacttgcaggaatggctggaagagaaggt
ggattcagtgcatttaatcagctgaaaatggctcgttttactattgtggatggaaagtct
ggaaaaggtgttacgtttaaggatgtggcagggctgcatgaggccaaactggaagttagg
gagttcgttgattacctgaagagtccagaacgttacctgcagcttggtgcgaaagttcca
aagggatctttattgcttggaccaccagggtgtggaaaaacactactggcaaaagctgtt
gcttcggaagctcaagtccctttcttagccatggctggatcagagtttgtggaggtgatt
ggaggtctaggtgctgcaagggtacgaagtttatttaaggaggcccgagctcgtgcgccc
tgcattgtgtacattgatgaaattgatgcagtgggtaagaaacgatccaccagcatgtct
gggtttgctaatacagaggaagagcagacactgaatcagctgttagtggaaatggatgga
atgggcacaacagatcatgtaatagttctggcatcaaccaaccgtgcagatattttggac
agcgccttaatgagacctggccgactggatcgacatatatttatagactttcctactttg
caggaaggaaattttgagcaacatttgaagagtctaaagtaactcgtccggcttggtttt
tattcccaacgattggctgagctagctccaggattcagtggagctgacatcngcaacatc
tgtaatgaagcagcattacatgcagccagagaaggggagaaatctgttgacaccttaaat
tttgaatatgcagtagagaaggtcatagcaggcactgccaagaagagtaaaattctctcc
aaagaagaacagaaaataatagctttccatgagtctgggcatgttcttgtgggttggctt
cttgagcacacagaagctgtcttaaaggtctcgatagcaccacgaacaaatgctgcactg
ggatttgcacagatcctaccacgagagcagtatctcttcaccaaagaacagctttttgaa
cgcatgtgtatggctctaggaggtcgtgtgttgcagagcgtcacatttaatagagtcaca
acaggtgctcaggatgacttgcgaaaagttacaagagtggcttactccatggtgaaatcc
tatggaatggttgaaacatttggacacatttcattccctgatacagagaaantgggagta
attggtcgacgaccattcagccaaggactccaggagcacatggatcatgaagtcaatata
ttggtggctagtgcttacaggcgcacagagaagctcctactggataaccgggataaactc
cttgcagtaacttgcaatgcactcatggagaaagaagttctaaattatgatgacattgaa
atgcttatcggtgctccaccctttggcccaaagaaaatgataccaccccagagctggatt
gaagctgagaaagacaaacaagatacaggggaggatgaacctccagcaaggcatgtacaa
gatgatgaacaaaccctgaatccagtttaa
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