Scyliorhinus canicula (smaller spotted catshark): 119973958
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Entry
119973958 CDS
T11175
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119973958 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119973958 (slc6a11b)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
119973958 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
119973958
NCBI-ProteinID:
XP_038668578
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Position
11:28009676..28189348
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AA seq
622 aa
AA seq
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MTADKAIPVINGKPEDAMDTEASNVNLVRTNDKKVTDRGQWNNKIEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLVPYVIFFIGCGIPVFLLETALGQYTSEGGITCWRKICPLFEGI
GYATQVIEAHLNVFYIIVLAWAIFYLLNCFTTELPWATCGHDWNTKNCVEFQKMNSTNCS
HTALPNATSPVIEFWERRVLGLSSGIDHIGSIRWELALCLLAAWIICYFCIWKGPKSTGK
VVYVTATFPYLMLLVLLIRGVTLPGAGEGIRFYLYPDISRLSDPQVWLDAGTQIFFSYAI
CLGCLTALGSYNPYHNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAE
SGPGLTFIAYPKAVTMMPLAPLWAVLFFLMLIFLGLDSQFVCMESLVTAIIDMYPKIFRT
GYRREQLICVIAIASYLVGLIMVTEGGMYVFQLFDAYASSGMCLLFVAIFECICIGWAYG
SNRFYDNIEDMIGYRPFILIKWCWNFITPGICSAIFIFFIVKYKPLKYNNTYTYPDWGYA
VGWALALSSMVCIPLGFIFKLWTTEGTFLERIKKLITPSPDLRRRGIGPSNADTCCSIIN
ECDGKLKGDGRIPTITEKETHF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggacaaagcgatcccggtcatcaatggcaagccagaagatgcgatggacacc
gaggcttccaatgtcaatttagtccgcaccaacgacaagaaagtgacagataggggccag
tggaataacaagatcgagtttgtcttgtctgtggcgggggagattattggattaggaaac
gtgtggcggttcccctacctctgttacaagaacggaggcggggcctttctagtaccttac
gtgatatttttcatcggctgtgggataccggtgtttctcctggagactgcactgggccag
tacaccagcgagggagggattacgtgttggaggaaaatttgcccgctctttgaaggtatc
ggatatgcaacacaggtgattgaggcgcatctgaatgtgttttacatcattgttctggcg
tgggccatattctacctgctcaattgcttcacaactgaacttccctgggctacctgcgga
catgactggaacacaaaaaactgtgtcgagtttcagaagatgaattccaccaattgcagt
cacacagctctaccaaatgcaacctcgcctgtcattgagttctgggaacgtagagtgctt
ggattatcaagtgggattgaccatattggaagtatacgatgggaactggctctatgtctt
cttgctgcttggattatctgttatttctgcatttggaagggaccaaagtccactggaaag
gtggtgtatgtaacagcaacgttcccctacctgatgctgctggttttattgattcgagga
gtgactcttcccggagctggagagggaataaggttttatctttacccggatatctcccgc
ttgtcggaccctcaggtctggctggatgctggtacccagattttcttctcgtatgccatt
tgccttggatgcttgactgcgttaggaagttataatccctatcataacaactgctacagg
gattgcataatgctatgctgcctgaacagtggcaccagctttgttgctggttttgctatt
ttctctgtgttgggattcatggcttacgaacaaggagtgccgatagcagaagtagccgaa
tcaggtcctgggttgacattcattgcttatccgaaggctgtcactatgatgcctcttgca
ccattatgggctgttctattcttcttgatgctcattttccttggactggacagtcagttt
gtctgtatggaaagtctggtgaccgctataatcgacatgtatccaaagatattccgcaca
ggatacagaagagagcagttaatttgtgttatcgcaattgcgtcttacctggttggatta
ataatggtaacagagggaggaatgtacgtcttccagctcttcgatgcatatgcttcgagt
ggcatgtgtcttctcttcgtcgccattttcgagtgtatttgtataggctgggcctatgga
agtaatcggttctacgacaatattgaagacatgattgggtacagaccattcattctaatt
aaatggtgttggaatttcatcactcctggcatatgttcagcgattttcattttcttcatt
gtgaagtataaaccacttaagtataacaacacgtacacctacccagactggggttatgcg
gtagggtgggccctagccctttcttccatggtttgcatacctcttggatttatcttcaaa
ttatggactactgaaggaacctttctagagagaattaagaagcttataacaccgagtcca
gacttgcggcgaagaggaatcggaccatccaatgcagacacgtgctgcagcataattaat
gaatgtgatggtaaacttaaaggcgatggacgtattcctaccatcacagaaaaagagacg
cacttctga
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