Scyliorhinus canicula (smaller spotted catshark): 119978279
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Entry
119978279 CDS
T11175
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-7-like protein 1
KO
K11318
ataxin-7
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scau03021
]
119978279
03036 Chromosome and associated proteins [BR:
scau03036
]
119978279
Transcription machinery [BR:
scau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119978279
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119978279
SAGA complex
119978279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
OrsD
Motif
Other DBs
NCBI-GeneID:
119978279
NCBI-ProteinID:
XP_038675706
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Position
15:127527068..127566047
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AA seq
773 aa
AA seq
DB search
MAARERAXVMMAASERRLPSPESFVGQSWSKWIERAEVLRLSDESEDSGKDVRKKFETMR
LIREDMPIFGHCPAHDEFFLVVCNQCGQVVKPQAFQMHCERRHGSLNKLSARRVPALNSP
SSIVLQKSRYNSVQTAATSNHGTSSSKEKLQSPGNKVLQLEVPSMGPKENLCLFVPVVNL
EKIPTLRKVDSSCIKLSSKLPAVSLSPPDPTLPSSKPTSAPALDPTSKTMTASAIPKAAD
PLLPAAVIQNGKRGRSPVLEEPTLSNRRNNHKIHRRTMEKESDLNKHCGVMDPDTKKHCT
RSLTCKTHSLTQRRSVPGRRLAFDELLAEHRASLKYKETGKERKQQAKETVPLSPVQETA
PSSVMLGLSPNQPKVASCSASRVSLESELTDDEAPPADPVPHPELPYPLFRFEINSRLSS
EESDGEMMEESEQPDCHYSRLHPKPLAFCTFGSRMISRGCYVFNRRLDHFRSVLNSMVER
HLNSQMWRKIPPATDQQRAPLSVPPPAPSPLSIRSASSLSATSSSPSCMAAELKQAPSPA
SLAEARAPTDPSACCCPLPLPTPPAPTPSPSSGRTPWAKTSRASGFHQELRPTGETSPSK
RKKPTTSSSDPLPSSEPPLKRNCVLSLDRIIAPLPGGTASRSPHSNTSSHNANNGLNAHG
SKAGRSGQTGILGLSGNSLKGTGRTVEHFDPKRDARLCEARRLGAHNPSSPPPTASPPAR
TEGRKRKNAASCSKPTKIVKTPEVNCVQRKREESLATTRPHSNSHTHKAKVRP
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgggagcgcgcgngtgtgatgatggcggcctcggagcgcaggctcccgagt
cccgagtcgttcgtgggccagtcctggagcaagtggatcgagcgggccgaggtgctgcgg
ctgtcggacgaatcggaagatagtggcaaggatgtgagaaagaagtttgaaacaatgagg
ctcattagagaagatatgccaatctttggtcactgtccagcccatgatgagttcttcctc
gtggtgtgtaaccagtgtggacaggtagttaaacctcaggcattccagatgcactgtgag
agaagacatgggtctctgaacaaactgtcagcacgaagggttcctgccttgaattcccca
agctccattgtcctacagaaatcgcgatacaacagtgtccaaactgcagctacctctaac
catggcaccagttcctccaaagagaagctacagagccctggtaacaaggtgctacagtta
gaagtgccttcaatgggaccaaaagaaaatctgtgcttgtttgttcctgtggtgaacctg
gaaaagatcccaactctcagaaaggtggacagctcctgcatcaaactgagctccaagctc
cctgccgtctccctgtcccctcccgatcccaccttgccatcttccaaacccacttcggca
cctgcccttgatcccacgtcaaagactatgacagcgagtgcaatcccaaaggcggccgat
cctctactgccggctgcggtgattcagaacggtaaaagggggaggtcacctgtgctggag
gagccgacacttagtaacaggagaaacaaccataaaattcacagaagaacaatggagaaa
gaaagtgacctcaataaacactgcggagtcatggacccagacaccaagaaacactgcaca
cgttcgctaacttgtaagacgcactcgctgactcagagaaggagtgtgcccgggcgccgg
cttgcctttgatgagttgctggcagaacatcgggcaagtctgaagtacaaggaaaccggt
aaagagagaaagcaacaggccaaggagaccgtgccgctctctcctgtgcaggagaccgct
cccagttcggtgatgctggggctgtctccgaaccagccaaaggttgccagctgctctgct
tcgagggtttctttggaaagtgaactgactgatgatgaggcaccccctgctgatcccgta
ccacaccccgagctcccctatccgttgttcaggtttgagataaacagtcggctatcgagt
gaggagagtgacggagagatgatggaggaatcggagcagccagattgtcactattcacga
ttgcatccgaagcctctggcattttgcactttcggaagccgaatgattagtcggggctgt
tacgtcttcaacaggcgcttggatcacttccgttcggttctcaattccatggtggaaagg
catctgaattctcagatgtggaggaagattcctccagcaacagatcagcagagagctcca
ctttctgttccacctcctgccccctcaccgctttctatccggtctgcgtcgtctctttca
gcaacttcatcttcgccttcttgcatggccgcggaactgaagcaagcaccgtcgcccgcc
agccttgctgaagctcgagcacctacggacccttctgcctgctgctgtccactccctcta
ccaacccctccagccccaaccccatctccctcctcaggcagaacaccctgggcgaagacc
agtcgggcatccggattccaccaagaactccgtcccactggcgagacatcaccgagcaaa
cggaagaaaccgacgacctcctcctctgatccactcccttcctctgagccccccctcaaa
agaaactgcgtattgagtctggacaggataattgcccccctccctggtgggacagcctct
cgctctccccactcaaatacctcctcgcataatgctaacaacggactcaatgcccacgga
tccaaagcaggacgctcaggacaaactggaattctgggcctttcagggaactccctcaaa
gggactggtaggacggtggaacactttgatcccaagagggatgcccgcctctgtgaggca
cgccgactgggggctcacaatccttcatccccaccaccgaccgccagccctcccgcacga
accgagggcaggaaacggaagaatgcagcctcctgttcaaaacccactaaaatagtcaaa
acccccgaagtcaactgtgttcagagaaagagagaagagagcctggcaacaactcgacct
catagcaactctcacacgcacaaggcaaaagtgcgcccatga
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