Streptomyces cavourensis: CVT27_18990
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Entry
CVT27_18990 CDS
T07023
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
scav
Streptomyces cavourensis
Pathway
scav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CVT27_18990
09124 Replication and repair
03420 Nucleotide excision repair
CVT27_18990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scav03021
]
CVT27_18990
03400 DNA repair and recombination proteins [BR:
scav03400
]
CVT27_18990
Enzymes [BR:
scav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CVT27_18990
Transcription machinery [BR:
scav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CVT27_18990
DNA repair and recombination proteins [BR:
scav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CVT27_18990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
ETAA1
Motif
Other DBs
NCBI-ProteinID:
ATY97297
LinkDB
All DBs
Position
complement(4278627..4280267)
Genome browser
AA seq
546 aa
AA seq
DB search
MSCLIVQSDKTLLLEVDHELAEACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGHD
AEQVVDALVEYSRYPVPHALLVDIAETMARYGRLTLSKHPVHGLVLTTTDRPVLEEILRS
KKVQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWAL
RPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAEAKATTLILVTNTVSARQWKHELV
KRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGIYPHLELFDSRDWGLVVYDEVHL
LPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPAD
CVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHRGEQTLVIGQYIDQL
DELGEHLDAPVIKGETSNAQREKLFDAFRNGEISVLVVSKVANFSIDLPEATVAIQVSGT
FGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDAD
ELLAES
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgcctgatcgtccagagcgacaagacgctcctcctggaggtcgaccacgagctg
gccgaggcctgccgccgggccatcgcccccttcgcggagctggagcgtgcgcccgagcac
atccacacgtaccgggtcaccccgctcggcctctggaacgcccgtgccgccgggcacgac
gccgagcaggtcgtcgacgcgctcgtcgagtactcccgctaccccgtgccgcacgcgctg
ctggtcgacatcgcggagaccatggcccgctacgggcggctcaccctctccaagcacccc
gtgcacgggctcgtcctcaccaccaccgaccggccggtgctggaggagatcctgcggtcg
aagaaggtgcagccgctcgtcggcgcccggatcgacccggacaccgtggccgtgcacccc
tccgagcgcgggcagatcaagcagaccctgctcaagctcgggtggcccgccgaggacctt
gcggggtacgtggacggcgaggcccatccgatcgagctggccgaggacggctgggcgctg
cggccgtaccagaagcaggccgtcgaggggttctggcacggtgggtcgggggtggtcgtg
ctgccgtgcggggcgggcaagacgctcgtcggcgccggtgccatggcggaggccaaggcc
accacgctcatcctcgtcaccaacaccgtctccgcccgccagtggaagcacgagctggtg
aagcggacctcgctcaccgaggacgagatcggggagtacagcgggacgaggaaggagatc
cggccggtcaccatcgccacctaccaggtgctgaccacccggaggaagggcatctatccg
cacctggagctgttcgactcccgtgactgggggctcgtcgtctacgacgaggtccacctg
ttgcccgcccccgtcttcaagttcaccgccgacctccaggcccggcggcggctcgggctc
acggcgaccctcgtacgggaggacgggcgggagtccgacgtcttctcgctcatcgggccc
aagcgcttcgacgccccgtggaaggagatcgaggcgcagggctacatcgcgcccgccgac
tgcgtggaggtacgggtcaacctcaccgactccgagcggctcgcgtacgccaccgccgag
acggaggagaagtaccgcttctgcgccaccaccgccaccaagcggaaggtgaccgaggcg
ctcgtacggaagcaccggggcgagcagaccctcgtcatcgggcagtacatcgaccagctc
gacgagctgggcgaacacctggacgcccccgtcatcaagggcgagaccagcaacgcccag
cgcgagaagctcttcgacgcgttccggaacggggagatcagcgtcctcgtcgtctccaag
gtcgccaacttctccatcgacctgccggaggcgaccgtcgccatccaggtctccgggact
ttcgggtcgcgccaggaggaggcccagcggctggggcgcgtgctgcggccgaaggccgac
gggcacgaggcgcggttctactcggtcgtcgcccgcgacaccatcgaccaggacttcgcg
gcgcaccgccagcggttcctggccgagcaggggtacgcgtaccggatcgtcgacgcggac
gagctgctggcggagagctag
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