Gracilinema caldarium: Spica_1719
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Entry
Spica_1719 CDS
T01573
Name
(GenBank) Squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
scd
Gracilinema caldarium
Pathway
scd00906
Carotenoid biosynthesis
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Spica_1719
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scd01006
]
Spica_1719
Enzymes [BR:
scd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Spica_1719
Prenyltransferases [BR:
scd01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Spica_1719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AEJ19862
UniProt:
F8F215
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All DBs
Position
complement(1917357..1918280)
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AA seq
307 aa
AA seq
DB search
MEASTVSKGSISPDELAAFQRATFQKGSKTYFNSSIFFPKQVRERVFTLYAFVRRADDFV
DAQPQDREGFYRFRTYAEKALGIHLHQHETGLSVAGIETGLPAPEDQAVIEAYAELGREL
GFDPAWTVAFLDAMEADLIKNRYDSLEECLSYMYGSAEVIGLFMSRCMDLPDRAYEAAQL
LGRAMQYINFIRDVAEDRALGRRYLPLEGEVEDIVDPQWAFNHPERFSAWLVGHLNRYRQ
WQIGAVAGYRSIPYRYRLPIKTAADMYWWTAKTIEQNPLVVFQRKVKPGKGRILLQFFTN
LFAGIRV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcatccacagtgtccaaggggtcgatcagccccgatgaactggctgcatttcag
cgcgctacctttcagaagggcagtaaaacctattttaactcaagcatttttttcccaaaa
caggtccgggagcgggtgttcaccctctatgcctttgtccgccgggctgatgactttgtc
gatgcccagccccaggatcgggaagggttttaccggtttcgcacttatgctgagaaagct
ctgggtattcatcttcaccaacatgaaacaggactgtccgtagctggcattgaaacagga
ctgccggcccctgaagatcaggccgtcatcgaggcctatgcggagttgggccgtgaactg
ggattcgatcctgcctggacagtggcttttttagatgccatggaagcggacctcatcaag
aaccgttatgacagcctggaagaatgtctttcgtatatgtatggttctgcggaggtgatt
gggctattcatgagccgctgtatggacttgcccgacagggcctatgaagcggcacaactg
cttggccgggcgatgcagtacatcaattttatccgggatgtggctgaggaccgcgcatta
ggccgccgttatttaccgctggaaggtgaagtcgaagatattgtcgatccccagtgggca
ttcaatcaccccgaaaggttttctgcatggctggtaggccacctgaacagataccggcaa
tggcaaatcggtgctgttgcggggtaccgctctatcccctaccggtatcgccttcccatt
aaaaccgctgcagacatgtactggtggactgcaaaaaccatagaacagaacccgctggtg
gtgtttcaacgcaaggtaaaacctggcaagggcaggatactgcttcagttctttacaaat
ctttttgcgggtatacgggtatga
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