Saccharomyces cerevisiae (budding yeast): YFL008W
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Entry
YFL008W CDS
T00005
Symbol
SMC1, CHL10
Name
(RefSeq) cohesin subunit SMC1
KO
K06636
structural maintenance of chromosome 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce04111
Cell cycle - yeast
sce04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
YFL008W (SMC1)
04113 Meiosis - yeast
YFL008W (SMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sce03036
]
YFL008W (SMC1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
YFL008W (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
YFL008W (SMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-GeneID:
850540
NCBI-ProteinID:
NP_116647
SGD:
S000001886
UniProt:
P32908
Structure
PDB
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All DBs
Position
VI:119429..123106
Genome browser
AA seq
1225 aa
AA seq
DB search
MGRLVGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNHLRSN
ILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYK
IDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYKK
EYEELKEKIEKLSKSATESIKNRRRIHGELKTYKEGINKNEEYRKQLDKKNELQKFQALW
QLYHLEQQKEELTDKLSALNSEISSLKGKINNEMKSLQRSKSSFVKESAVISKQKSKLDY
IFKDKEKLVSDLRLIKVPQQAAGKRISHIEKRIESLQKDLQRQKTYVERFETQLKVVTRS
KEAFEEEIKQSARNYDKFKLNENDLKTYNCLHEKYLTEGGSILEEKIAVLNNDKREIQEE
LERFNKRADISKRRITEELSITGEKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIES
ANNQEYDLNFKLRETLVKIDDLSANQRETMKERKLRENIAMLKRFFPGVKGLVHDLCHPK
KEKYGLAVSTILGKNFDSVIVENLTVAQECIAFLKKQRAGTASFIPLDTIETELPTLSLP
DSQDYILSINAIDYEPEYEKAMQYVCGDSIICNTLNIAKDLKWKKGIRGKLVTIEGALIH
KAGLMTGGISGDANNRWDKEEYQSLMSLKDKLLIQIDELSNGQRSNSIRAREVENSVSLL
NSDIANLRTQVTQQKRSLDENRLEIKYHNDLIEKEIQPKITELKKKLDDLENTKDNLVKE
KEALQNNIFKEFTSKIGFTIKEYENHSGELMRQQSKELQQLQKQILTVENKLQFETDRLS
TTQRRYEKAQKDLENAQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDELQKKFVTKQS
ELNSSEDILEDMNSNLQVLKRERDGIKEDIEKFDLERVTALKNCKISNINIPISSETTID
DLPISSTDNEAITISNSIDINYKGLPKKYKENNTDSARKELEQKIHEVEEILNELQPNAR
ALERYDEAEGRFEVINNETEQLKAEEKKILNQFLKIKKKRKELFEKTFDYVSDHLDAIYR
ELTKNPNSNVELAGGNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALA
LLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKNTMFEKSDA
LVGVYRQQQENSSKIITLDLSNYAE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtttagttggcttagaactaagtaatttcaagtcctatagaggcgttaccaag
gtaggattcggcgagtcgaatttcacaagtattatcggtcctaacggatctggtaaatcg
aatatgatggatgctatctcattcgtactcggtgtgcggagtaatcatttgaggtcaaac
atcttgaaagatttaatctatagaggtgttctaaacgatgagaatagtgacgattatgat
aacgagggcgctgcctcttcgaacccacaatccgcatacgtgaaggcattttatcaaaaa
ggtaacaaactggtggagctgatgaggataatttccagaaacggtgacactagttataaa
attgatggaaaaactgtctcctataaggactattctatatttcttgagaacgaaaatatt
cttatcaaagccaaaaattttctagtgttccagggtgatgttgagcaaattgcagcacaa
tctcccgtagaattatcaagaatgtttgaagaagtatcaggttctatccaatacaaaaag
gagtatgaagagttgaaggaaaagattgagaaattaagcaaatctgcaaccgaatctata
aaaaataggagaaggatccatggagaattgaagacatataaagaaggtatcaataagaac
gaggagtataggaaacaattggacaaaaaaaatgaattacagaagttccaggctctatgg
cagttatatcatttagagcaacaaaaagaggagctaacggacaagctgtccgcattaaac
tctgaaatatcgtctttaaagggaaaaataaataacgagatgaaatcattacaacgctca
aaatcttcctttgttaaagaaagcgcagtaatttctaagcaaaaaagtaaattagattat
atcttcaaggataaggaaaaattagtctcggatttacggctcataaaggttcctcaacag
gcagcagggaagcgaatttcccatatagaaaaaagaatcgaaagtttacagaaagatctt
caaagacagaagacttatgtggagagatttgaaacacaactaaaagtggtgaccagatca
aaggaagcttttgaagaggaaatcaaacaatctgctagaaactatgacaaattcaagcta
aatgaaaatgatttaaagacatataattgcttacatgaaaaatatctgactgaaggtggg
tcaatcctagaagaaaaaattgccgttttgaacaacgataagcgagaaatccaagaggaa
ttggagagattcaacaaaagggcagatatttctaaaagaaggataacggaggagctttct
ataacaggagaaaaattggacacgcaattaaacgatttaagagtttctttgaatgagaaa
aacgcccttcatactgaacgtttgcacgagctgaaaaaattacaatctgatattgaatct
gctaataatcaagaatacgacttaaatttcaagttgagggaaacgttggttaagatcgat
gacttgagtgctaatcaaagagaaacaatgaaagaaagaaaactaagagaaaatatagca
atgttgaaaagattcttccccggagtaaaaggtcttgttcatgatctttgtcacccaaaa
aaggagaaatatggcttggcagtgtctaccatcttaggtaagaactttgattccgtcatt
gtagaaaatttaaccgtagctcaagaatgcattgcatttttgaagaagcaacgtgcgggc
actgcatctttcataccactagacacaattgagacagagttacctacattatcattgcct
gactcacaagactatattttatcaattaatgctattgactacgagccggaatatgaaaaa
gcgatgcaatatgtgtgtggcgattccatcatatgtaatacgttgaatattgctaaagat
ctgaaatggaaaaagggcataagaggcaaattggttacaattgaaggtgctttgatccac
aaggccggtttgatgacaggtggtatatcaggagatgccaataataggtgggataaagaa
gaatatcaaagcttaatgtctttaaaagacaaattactaatccaaatcgatgaactttcc
aacggtcaacgctctaattcaatcagagcaagagaagttgaaaatagtgtttcactattg
aactcggacatagcaaatttgagaactcaagtaacacaacaaaaacgctccttggatgaa
aatcgtttagagattaagtaccataatgacttgatagagaaagaaattcaaccgaagata
actgaactaaagaagaagctagatgatttagaaaatactaaagataatttagtgaaagag
aaggaggctttacaaaataatattttcaaagaattcactagtaaaattggctttacaatc
aaagaatatgaaaatcattccggtgaattgatgagacaacaatctaaagaattacagcag
ttacaaaaacaaattttgaccgttgaaaataagttgcagtttgagacagacagactaagt
actactcaaagaagatatgaaaaggcgcaaaaggatttagagaatgctcaagttgaaatg
aagtctttggaagaacaggaatatgcaatagaaatgaaaatcggatcaatagagtctaaa
ttggaagaacacaaaaatcacttagatgagttacagaagaaatttgtaacgaagcaaagt
gaattaaattccagcgaagatattctagaggacatgaacagcaacttacaagtcttaaaa
agggaaagagacggtataaaggaagatattgaaaagtttgatttagagagagtaacagcg
ttaaagaattgtaaaatttctaatataaatatacctatatcatctgaaacaacgatagat
gatttaccaatatcttccactgataatgaagcaattacaatttccaacagtatcgatata
aactataaaggactacctaaaaaatacaaagaaaacaataccgattcggcaaggaaggag
ctggagcagaagattcatgaagtggaggaaatattgaacgagttgcagcccaatgcaaga
gctttggagagatacgacgaggcggaaggaaggtttgaagtgattaataacgaaacagaa
caactaaaggccgaagaaaagaaaatattaaaccagttcctaaaaattaagaaaaaaaga
aaggaactgttcgaaaagacatttgattatgtgagcgaccatttagacgcaatctacagg
gaacttactaaaaatcccaactccaatgtggaattggccggtggtaacgcttctttaacc
atagaagacgaagatgaaccgttcaatgcgggaatcaaatatcatgccactccgcctctt
aaaagattcaaagacatggaatatctttctggtggtgaaaaaaccgtagctgcattagct
ctattatttgctattaattcctaccagcctagtcccttcttcgtgctggacgaagtggac
gcagccctagacattactaacgtccagagaattgctgcctatataagaaggcaccgtaat
ccagatctccaattcattgtcatttcattgaagaacaccatgtttgaaaaatctgacgct
ctcgttggggtttacagacagcaacaagaaaactcgtcgaagatcataactttggacttg
agcaattacgcagaataa
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