Saccharomyces cerevisiae (budding yeast): YKL173W
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Entry
YKL173W CDS
T00005
Symbol
SNU114, GIN10
Name
(RefSeq) U5 snRNP GTPase SNU114
KO
K12853
114 kDa U5 small nuclear ribonucleoprotein component
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YKL173W (SNU114)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YKL173W (SNU114)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
YKL173W (SNU114)
Complex C
U5 SnRNP specific factors
YKL173W (SNU114)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
EFTUD2
GTP_EFTU_D2
MMR_HSR1
EFG_III
Motif
Other DBs
NCBI-GeneID:
853681
NCBI-ProteinID:
NP_012748
SGD:
S000001656
UniProt:
P36048
Structure
PDB
PDBj
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All DBs
Position
XI:122517..125543
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AA seq
1008 aa
AA seq
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MEGDDLFDEFGNLIGVDPFDSDEEESVLDEQEQYQTNTFEGSGNNNEIESRQLTSLGSKK
ELGISLEHPYGKEVEVLMETKNTQSPQTPLVEPVTERTKLQEHTIFTQLKKNIPKTRYNR
DYMLSMANIPERIINVGVIGPLHSGKTSLMDLLVIDSHKRIPDMSKNVELGWKPLRYLDN
LKQEIDRGLSIKLNGSTLLCTDLESKSRMINFLDAPGHVNFMDETAVALAASDLVLIVID
VVEGVTFVVEQLIKQSIKNNVAMCFVINKLDRLILDLKLPPMDAYLKLNHIIANINSFTK
GNVFSPIDNNIIFASTKLGFTFTIKEFVSYYYAHSIPSSKIDDFTTRLWGSVYYHKGNFR
TKPFENVEKYPTFVEFILIPLYKIFSYALSMEKDKLKNLLRSNFRVNLSQEALQYDPQPF
LKHVLQLIFRQQTGLVDAITRCYQPFELFDNKTAHLSIPGKSTPEGTLWAHVLKTVDYGG
AEWSLVRIYSGLLKRGDTVRILDTSQSESRQKRQLHDISKTETSNEDEDEDDETPSCEVE
EIGLLGGRYVYPVHEAHKGQIVLIKGISSAYIKSATLYSVKSKEDMKQLKFFKPLDYITE
AVFKIVLQPLLPRELPKLLDALNKISKYYPGVIIKVEESGEHVILGNGELYMDCLLYDLR
ASYAKIEIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMI
QDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYGWDSLASRNVWSFYNGNVLINDTLP
DEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIP
LMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLL
EVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPIN
SLSRDFVMKTRRRKGISTGGFMSNDGPTLEKYISAELYAQLRENGLVP
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgacgatttattcgatgagtttggaaatttgatcggagttgatccttttgac
tcggatgaagaagaaagtgtgctggatgagcaagaacaatatcaaaccaatacgtttgag
gggagcggcaacaacaatgagattgagagcagacaacttacctcgttaggaagtaaaaag
gaacttggaatttccttagagcacccttatggtaaggaagtggaagtattaatggaaact
aagaacacacagtcaccacagactccactggtagagccggttacagaacgaacaaagttg
caagagcatacaatttttacacaattaaaaaaaaacattccgaagactagatataatcga
gactatatgttatcaatggctaacattccggagaggataataaatgttggtgtcattgga
cctcttcactcaggtaagacctctttgatggatctcctagtaatcgactcacacaaacgc
ataccagatatgtctaagaatgtagaacttggatggaaaccgctaagatacctggataat
ttgaaacaagagattgaccggggtctttccattaaacttaatggttccactctactctgc
accgatttagaatccaagtctagaatgataaactttttggatgcaccagggcatgttaat
tttatggatgaaacggcagtcgcacttgcagcaagtgatttggttttaatcgtgatagat
gttgtagaaggtgttacatttgtggtagagcaattgataaaacaaagtattaaaaataat
gtagcaatgtgttttgttataaataaactcgacagattgattctagatttaaagttgcca
ccaatggacgcatacttgaagttaaatcatataattgcaaatatcaattcctttacgaag
ggaaacgtgttttcaccaatagacaataacataatatttgcgtctacaaagctgggcttc
acattcactatcaaggaatttgtttcttattattacgcccactccataccttcttctaag
atagacgactttaccacaaggctatggggtagcgtatattaccataaaggtaatttcagg
acaaaaccatttgaaaatgtagagaagtacccgactttcgttgaatttatcctcatcccg
ctttataaaatattttcctacgctttatctatggagaaagataaattaaagaatttgtta
aggtctaactttagagttaatttaagtcaagaggccctccagtacgatccgcaacctttt
ttaaaacacgttctacagttaatatttaggcaacaaaccggtcttgtagatgcgataacc
agatgttatcaaccatttgaattattcgacaataagacagctcatctttcaattccagga
aaatctacaccagaaggcactctttgggctcatgtactgaaaactgtggattacggtgga
gcagagtggtcccttgtacggatatactctggacttttgaagagaggggatacagtacgt
atacttgatacatcacaatctgaatctcgccaaaaaagacagttgcatgatatctcaaag
acggaaacctccaacgaagatgaagatgaagatgacgaaacgccttcatgtgaggtcgaa
gaaattggcttattaggtggcagatatgtctatccggttcatgaagcacacaaaggacag
atagtattaataaaaggtatttcaagtgcatatattaaatccgcgacgttgtactctgta
aagagtaaggaggacatgaaacagctaaaatttttcaaacctttagattatattaccgag
gcagttttcaaaattgttcttcaacctttactgccaagggaattacccaagttattggat
gccctgaacaaaatttcgaaatactacccaggcgttattattaaagttgaggaatctgga
gaacatgtaatactaggaaatggagagctgtatatggactgtttgttgtatgatctaaga
gcgagttatgcaaagatagaaattaaaatatctgatcctttaactgttttttctgaaagt
tgctcaaatgaatcgttcgcttcaatacctgtaagtaattcgatatctcgccttggtgag
gaaaatttaccaggtctgtcgattagtgtagccgctgaaccaatggactctaaaatgatt
caggatttgagcaggaacacattgggaaagggtcaaaactgcttggatattgacggaata
atggacaacccaaggaaactatccaaaatattgagaaccgagtatgggtgggattcgttg
gcatcaagaaacgtttggtctttttataatggcaacgtgttgattaatgacactttgcca
gatgaaatcagtcctgaattattatccaaatataaggaacaaataatacaaggattttac
tgggctgtaaaagaggggcctttggcagaagaaccaatttatggtgtacagtataaattg
ttatcgatctcagtaccttccgacgtaaacattgacgttatgaaaagtcaaattattccg
ctaatgaaaaaagcctgttacgttggcttactgacagcaatcccaattttattggaaccc
atctatgaagttgacatcacggtccacgcccccttgctgccaatagtagaggaacttatg
aagaagagacgtggaagcaggatatacaaaacaataaaagtggcagggacaccattgttg
gaggttcgtggacaagttccggttattgaatctgcaggattcgagacagatttgagatta
tctacgaatggtcttggtatgtgtcagctgtacttttggcacaagatatggaggaaggtt
cctggtgatgttttggataaagatgcgtttattccaaaattgaaacccgcacctatcaac
agtttaagtcgtgatttcgtgatgaaaacaagaaggcggaagggtatttctacaggtgga
tttatgtcaaatgatggtcctacgcttgaaaagtatataagcgctgaattatacgctcaa
ttaagagaaaatggcttagtaccgtga
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