Saccharomyces cerevisiae (budding yeast): YMR288W
Help
Entry
YMR288W CDS
T00005
Symbol
HSH155
Name
(RefSeq) U2 snRNP complex subunit HSH155
KO
K12828
splicing factor 3B subunit 1
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YMR288W (HSH155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YMR288W (HSH155)
03036 Chromosome and associated proteins [BR:
sce03036
]
YMR288W (HSH155)
Spliceosome [BR:
sce03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
YMR288W (HSH155)
Complex B
YMR288W (HSH155)
Complex C
U2 SnRNP specific factors
YMR288W (HSH155)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
YMR288W (HSH155)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT_EZ
TOR1L1_N
HEAT
HEAT_MROH2B_C
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_GCN1
GNC1_N
Htt_N-HEAT_1
Vac14_Fab1_bd
TPR_IPO5
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
855332
NCBI-ProteinID:
NP_014015
SGD:
S000004901
UniProt:
P49955
Structure
PDB
PDBj
LinkDB
All DBs
Position
XIII:845571..848486
Genome browser
AA seq
971 aa
AA seq
DB search
MSHPIQFVNANNSDKSHQLGGQYSIPQDLRENLQKEAARIGENEKDVLQEKMETRTVQNR
EDSYHKRRFDMKFEPDSDTQTVTSSENTQDAVVPRKRKSRWDVKGYEPPDESSTAVKENS
DSALVNVEGIHDLMFFKPSDHKYFADVISKKPIDELNKDEKKERTLSMLLLKIKNGNTAS
RRTSMRILTDKAVTFGPEMIFNRLLPILLDRSLEDQERHLMIKTIDRVLYQLGDLTKPYV
HKILVVAAPLLIDEDPMVRSTGQEIITNLSTVAGLKTILTVMRPDIENEDEYVRNVTSRA
AAVVAKALGVNQLLPFINAACHSRKSWKARHTGIKIVQQIGILLGIGVLNHLTGLMSCIK
DCLMDDHVPVRIVTAHTLSTLAENSYPYGIEVFNVVLEPLWKGIRSHRGKVLSSFLKAVG
SMIPLMDPEYAGYYTTEAMRIIRREFDSPDDEMKKTILLVLQKCSAVESITPKFLREEIA
PEFFQKFWVRRVALDRPLNKVVTYTTVTLAKKLGCSYTIDKLLTPLRDEAEPFRTMAVHA
VTRTVNLLGTADLDERLETRLIDALLIAFQEQTNSDSIIFKGFGAVTVSLDIRMKPFLAP
IVSTILNHLKHKTPLVRQHAADLCAILIPVIKNCHEFEMLNKLNIILYESLGEVYPEVLG
SIINAMYCITSVMDLDKLQPPINQILPTLTPILRNKHRKVEVNTIKFVGLIGKLAPTYAP
PKEWMRICFELLELLKSTNKEIRRSANATFGFIAEAIGPHDVLVALLNNLKVQERQLRVC
TAVAIGIVAKVCGPYNVLPVIMNEYTTPETNVQNGVLKAMSFMFEYIGNMSKDYIYFITP
LLEDALTDRDLVHRQTASNVITHLALNCSGTGHEDAFIHLMNLLIPNIFETSPHAIMRIL
EGLEALSQALGPGLFMNYIWAGLFHPAKNVRKAFWRVYNNMYVMYQDAMVPFYPVTPDNN
EEYIEELDLVL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatccgattcaatttgtaaacgctaataatagcgataagagccaccaattaggc
ggtcaatattctattcctcaggatttgagggaaaacctgcagaaagaagctgcacgtatt
ggtgagaacgaaaaagatgtgctacaggaaaaaatggaaactaggacagtgcaaaatcga
gaggattcataccacaaaagaaggtttgatatgaagtttgagccggattccgatacacaa
actgttacgtcttcagaaaatacccaagacgctgtcgtgccaaggaaaagaaaatctcgt
tgggatgtaaaagggtacgagccacctgatgaatcttcaacagcggtcaaagaaaactct
gatagtgctttggttaatgtagaaggaatccatgatttgatgttttttaaaccttctgac
cataaatatttcgccgacgttatatccaaaaaacccatagatgagttaaataaggatgaa
aagaaagaaagaaccctgtcgatgttacttctgaaaataaaaaatggcaatacagcgagt
aggaggacttctatgcggattttaaccgataaagctgttacatttggtccagaaatgata
tttaaccgcttattgcccatattactagacagaagtttggaagaccaggaaagacatcta
atgatcaagaccatagatcgcgtcctttaccagctaggagatttaacaaaaccttacgtt
cacaaaatacttgtagtagctgccccattgctaatagatgaagatccaatggttcgttca
acaggccaggagataatcaccaatctgtctacagtcgctggcctaaaaaccattctaaca
gtaatgagacctgatattgagaatgaggatgagtatgttagaaatgtaacttcaagagcg
gcggctgtggtggcaaaagcccttggtgttaatcaattgcttcctttcatcaatgcagca
tgccactcacggaagtcttggaaagcaaggcatactggcataaaaattgtgcagcaaata
ggtatacttttgggaataggtgtcttgaatcatcttactgggctgatgagttgtatcaaa
gactgcctaatggatgatcacgttccggtgcgaattgttacagcacatactttatcaaca
ctagcagaaaattcttatccatatggtatcgaagttttcaacgttgtactggagccatta
tggaagggtataagaagtcatcgtggtaaagtgctatcttcttttttaaaagctgttgga
tctatgatcccattgatggacccagagtatgccggttattataccacagaagcaatgaga
ataattagacgtgaattcgactctcccgatgatgaaatgaaaaagaccattcttttagta
ttacaaaaatgtagcgctgtagaatccataacgccaaaatttctgagagaagaaatcgcg
ccagaattctttcaaaaattttgggtcagacgagtggcattggatagaccattaaacaaa
gttgttacatatactactgttacattagcaaagaaattaggttgttcttataccattgat
aaattattaacaccattgagagatgaagctgagccgttcagaacaatggctgtccatgct
gttactagaacagtaaacttattagggacagcagatttagatgagagattagaaacgagg
cttattgatgcgctcttgatagcatttcaagaacaaacaaatagtgattctataatcttt
aaagggtttggggcagtgacggtgtcacttgacatccgtatgaaaccgtttttagcaccc
attgtgagtacgattttaaatcatttaaagcataaaactcccttggttcgtcaacatgca
gcagatctatgtgccatactaataccagtcatcaagaactgtcacgaattcgaaatgttg
aataaattgaacattatattgtatgaatccttaggcgaagtatatccagaggtattaggt
tctataatcaacgctatgtactgtattactagcgtaatggatttggataaactacaacct
cctattaatcaaattttaccaaccttaactccaattttaagaaacaagcatagaaaagtc
gaagtaaacactatcaaatttgttggacttattggtaaattagcacctacctatgcacct
cctaaagaatggatgagaatatgttttgaactattagaacttttgaaaagtacaaataaa
gaaataagaagatcagcaaatgccacgtttggattcattgctgaagcaattggacctcac
gatgttcttgttgcgttattgaacaatttaaaggttcaagaacgtcagttacgtgtatgc
acggctgttgctatcggtatcgttgctaaagtgtgtggtccttacaacgtgctgccagta
atcatgaatgaatacacaacaccagagactaatgttcaaaacggtgttctcaaggccatg
tcattcatgtttgagtacattggtaacatgtctaaggattacatatacttcataacacca
ttattagaagatgcactcaccgatagggatttagttcatcgtcagacagcgtcgaacgta
ataacccacttagctttaaactgttcaggtacaggtcacgaagatgccttcattcattta
atgaatcttctaatacccaatatttttgaaacttcaccacatgctattatgcgtatttta
gaaggtttggaggcactgagtcaagctcttggccctggactattcatgaactacatatgg
gcaggattgttccatccagcgaagaatgtaaggaaagcattttggagggtgtataataac
atgtacgtaatgtaccaggacgccatggtacctttttaccccgttacaccagacaacaat
gaagaatatatagaagaactggatttagttctgtga
DBGET
integrated database retrieval system
