Streptococcus constellatus subsp. pharyngis C1050: SCI_1740
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Entry
SCI_1740 CDS
T02832
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCI_1740 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scg03021
]
SCI_1740 (rpoB)
03400 DNA repair and recombination proteins [BR:
scg03400
]
SCI_1740 (rpoB)
Enzymes [BR:
scg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCI_1740 (rpoB)
Transcription machinery [BR:
scg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCI_1740 (rpoB)
DNA repair and recombination proteins [BR:
scg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCI_1740 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
NusG_add
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
AGU80635
LinkDB
All DBs
Position
complement(1799330..1802896)
Genome browser
AA seq
1188 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFKDFLDHGLKEVFEDVLPISNFTD
TMDLEFVGYEIKESKYTLEEARIHDASYSAPIFVTFRLINKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIFDIFGDSDLVRNTIEKDIHKNPMDSRTDEALKE
IYERLRPGEPKTADSSRSLLVARFFDPHRYDLAAVGRYKINKKLNIKTRLLNQTIAEPLV
DPETGEILVEAGTVMTRSVIDSIADYLDGDLNKITYIPNDAAVLTDPVVLQKFKVVAPTD
PDRVVTIIGNANPGDRVHTITPADILAEMSYFLNLAEGIGRVDDIDHLGNRRIRAVGELL
ANQVRLGLSRMERNVRERMSVQDNEVLTPQQIINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYGH
LNKYGFIQTPYRKVDRETGLVTNEIVWLTADEEDEYIVAQANSKLTEDGRFAEAIVMGRH
QGNNQEFPSDQVDFMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPHAP
YVGTGMEYQAAHDSGAAIIAQHDGKVVYSDAAKVEVRREDGSLDVYHITKFRRSNSGTSY
NQRTLVKVGDTVEKGDFIADGPSMEKGEMALGQNPIVAYMTWEGYNFEDAVIMSERLVKD
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDALRDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGAGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIRVGDKMAGHHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSDDLWDTVREAGMDSDAKTILYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSTVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDINGRLRAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGMDDDVIHVDDLEKAREKAAQEARAAFEAEGKE
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcaatacgggaaacaccgtactcgtcgtagtttttcaagaatc
aaggaagttcttgatttaccaaatttgattgaaatccagacggattcgttcaaagatttt
cttgaccatggtttgaaagaagtatttgaagatgtacttcctatttcaaactttacagac
actatggatctggagtttgttggttatgaaatcaaagaatccaaatacactttagaagaa
gcacggattcacgatgccagctattctgcgcctatttttgtgacgttccgtttaatcaat
aaagaaaccggcgaaatcaagacgcaagaagtcttctttggcgattttccaatcatgaca
gaaatgggaacgtttatcatcaacggtggtgagcggattatcgtatcacagctcgttcgt
tctccaggtgtttacttcaatgataaagtagacaaaaatgggaaggttgggtatggttca
accgtcattccaaaccgtggagcttggttagagttggaaacggactcaaaagatattgcc
tacactcggattgaccgcactcgtaagattccatttacaacgcttgttcgtgcacttggt
ttctctggtgatgatgaaatctttgatattttcggtgatagcgatctcgttcgcaacacg
attgaaaaagatatccacaaaaatccgatggattcacgtacagatgaagcgctgaaagaa
atctatgaacgccttcgtccaggtgagcctaagacagcggatagctcacgtagtctgttg
gttgctcgtttctttgatccacatcgttatgacttggcggcagttggtcgttacaagatt
aataaaaaattaaatatcaaaacacgtttgttaaatcaaacgattgcagaacctttggtt
gacccagaaacaggagaaatcttagtagaagccggaacagttatgacgcgtagtgtcatt
gatagtattgcagactatttggatggagatttgaataaaatcacttatattccaaatgat
gcagctgtattgacagatccagtcgttcttcaaaaattcaaagtcgtggcaccaactgat
ccagatcgcgtggtaactattattgggaatgctaatccaggtgatcgggttcatacgatt
acaccagcggatatcttggctgagatgagctacttcctcaacttagcagaaggcatcggc
cgtgtggatgatattgaccacttgggaaatcgtcggattcgtgcggtaggtgaattgctt
gctaaccaagtgcgtcttggactttctcgcatggagcgcaatgtgcgtgaacgcatgagc
gtgcaagataacgaagtactgactccgcaacaaatcattaacatacgcccagttacagca
gctatcaaagaattctttggttcctctcaattgtctcaatttatggatcaacacaatcca
ctgtctgagttgtctcacaagcgtcgtttatctgccttaggacctggtggtttaacacgt
gaccgtgcaggatacgaagtgcgtgacgtgcactatacccactatggtcgtatgtgtccg
attgaaacacctgaaggaccaaatattggtttgatcaataacttgtcttcttatgggcat
ttgaataaatatggctttatccaaacgccttaccgtaaagtggatcgtgaaacaggtctg
gtcaccaatgaaatcgtctggttaacagcggatgaagaagatgaatacatcgttgctcaa
gcaaattctaagttaacagaagacgggcgttttgcagaagcgattgttatgggacgtcac
caagggaataaccaagaatttccttcagatcaggtggatttcatggatgtgtcgcctaaa
caggtagttgccgttgcgacagcatgtatcccgttccttgaaaatgacgactcaaaccgt
gctctcatgggtgccaacatgcaacgtcaagcagtaccgttgattgatccgcatgcacca
tacgttggaactggaatggaataccaagcagctcacgattctggtgcggcaattattgca
caacacgacggtaaagttgtctattctgatgctgctaaagttgaagttcgtcgtgaagac
ggttcgcttgatgtctatcatattacgaaattccgccgttcaaactctggtacttcttac
aaccaacgtacgctggtgaaagttggcgatacggttgaaaaaggcgactttattgcagac
gggccttctatggaaaaaggtgaaatggcgcttggacaaaatccaatcgttgcttatatg
acatgggaaggttacaactttgaagatgctgttatcatgagtgaacgtctagtgaaagat
gacgtttatacctctgttcacttggaagaatttgaatcagaaacacgtgatacaaagctt
ggtcctgaagaaattacgcgcgaaattccaaacgttggggaagatgcgctaagagacctt
gacgaaatgggaattatccgcattggtgctgaggtgaaagagggcgacattcttgtcggt
aaagtaacgccgaaaggtgaaaaagacttatccgctgaagaacgcctgcttcatgcaatt
ttcggtgataaatctcgtgaagtacgtgacacatctcttcgtgtaccacatggtggtgct
ggggttgtccgtgatgtgaaaatctttactcgtgcgaacggtgatgaattgcaatctggt
gtcaacatgttggtgcgtgtttacattgctcaaaaacgaaagatccgcgttggggataag
atggccggacaccacggaaataaaggggttgtttcccgtatcgttccagttgaggatatg
ccttatcttccagacggaacaccagtagacatcatgttgaacccacttggggtgccatca
cgtatgaatatcggacaggttatggagcttcaccttggtatggctgctcgcaaccttggt
atccacatagcaacgccagtatttgacggagcaagctcagatgacctttgggatactgtt
cgtgaagcaggcatggatagcgatgccaagacgattctttatgatggtcgtacgggcgag
ccgtttgacaaccgtgtatctgtcggtgtcatgtatatgattaaattgcaccacatggtc
gatgataagcttcatgctcgttcagttggtccttattcaaccgttacgcaacaaccactt
ggtggtaaagcgcaattcggtggacaacgttttggagaaatggaagtttgggctttggaa
gcttacggtgcttctaacgtccttcaagaaatcttgacctacaagtcagatgatatcaat
ggtcgtttgagagcttatgaagctattactaaaggtaaaccaattccaaaaccaggtgtg
ccagaatctttccgtgttcttgtgaaagaattgcagtcacttggtcttgacatgcgcgtc
ctagatgaagatgacaatgaagtagaacttcgtgacttggatgaaggcatggatgacgat
gtgattcacgtagatgaccttgaaaaagcgcgtgaaaaggcagctcaagaagcgagagca
gcttttgaagctgaaggaaaagaataa
DBGET
integrated database retrieval system
