Shewanella chilikensis: GII14_03515
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Entry
GII14_03515 CDS
T08813
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
schk
Shewanella chilikensis
Pathway
schk02024
Quorum sensing
schk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GII14_03515 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GII14_03515 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schk03019
]
GII14_03515 (hfq)
03036 Chromosome and associated proteins [BR:
schk03036
]
GII14_03515 (hfq)
Messenger RNA biogenesis [BR:
schk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GII14_03515 (hfq)
Chromosome and associated proteins [BR:
schk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GII14_03515 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QIJ03338
UniProt:
A0A6G7LNH0
LinkDB
All DBs
Position
745891..746166
Genome browser
AA seq
91 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPFNVSNHQGGGQQNYNSQHDDSSEQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccattcctgaacgcactacgccgtgagcgcgtt
cctgtttccatctacctggtcaacggtatcaagttgcagggacaggtggaatcttttgac
cagttcgttatcttgctgaaaaacacggttagccagatggtatataagcatgccatttca
actgttgtgccttctcgtccatttaatgtgagcaatcatcagggcggtggtcagcagaac
tataactcgcagcacgatgatagcagcgaacagtaa
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