KEGG   Shewanella chilikensis: GII14_03515
Entry
GII14_03515       CDS       T08813                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
schk  Shewanella chilikensis
Pathway
schk02024  Quorum sensing
schk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:schk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GII14_03515 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GII14_03515 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schk03019]
    GII14_03515 (hfq)
   03036 Chromosome and associated proteins [BR:schk03036]
    GII14_03515 (hfq)
Messenger RNA biogenesis [BR:schk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GII14_03515 (hfq)
Chromosome and associated proteins [BR:schk03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GII14_03515 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QIJ03338
UniProt: A0A6G7LNH0
LinkDB
Position
745891..746166
AA seq 91 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPFNVSNHQGGGQQNYNSQHDDSSEQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccattcctgaacgcactacgccgtgagcgcgtt
cctgtttccatctacctggtcaacggtatcaagttgcagggacaggtggaatcttttgac
cagttcgttatcttgctgaaaaacacggttagccagatggtatataagcatgccatttca
actgttgtgccttctcgtccatttaatgtgagcaatcatcagggcggtggtcagcagaac
tataactcgcagcacgatgatagcagcgaacagtaa

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