KEGG   Shewanella chilikensis: GII14_15540
Entry
GII14_15540       CDS       T08813                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
schk  Shewanella chilikensis
Pathway
schk02024  Quorum sensing
schk03060  Protein export
schk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:schk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    GII14_15540
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GII14_15540
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GII14_15540
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:schk02044]
    GII14_15540
Enzymes [BR:schk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     GII14_15540
Secretion system [BR:schk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   GII14_15540
  Eukaryotic Sec-SRP protein
   GII14_15540
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW AAA_33 AAA_24 FliD_C AAA_30 Mg_chelatase AAA_14 AAA_31 T2SSE TsaE YqeC APS_kinase AAA_16 Rad17 DUF5700 ArsA_ATPase
Other DBs
NCBI-ProteinID: QIJ05412
UniProt: A0A6G7LUG3
LinkDB
Position
complement(3408442..3409815)
AA seq 457 aa
MFENLTDRLSRTLKNISGRGRLTEENVKDTLREVRMALLEADVALPVVREFVSSVKERAV
GQEVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVLMMAGLQGAGKTTSVAKL
GKFLRTRQKKSVLVVSADVYRPAAIKQLETLANEVEVEFFPSDVSQKPVDIANAAIAYAK
RKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEEVERGVDKEKALKLASKVKSGGSFDLEDFREQLQQMKNMGGMMGMLEKLPGVGQL
PPDALAQVQNGKLTGQMEAIINSMTPNERKRPDMIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSAKGGMHKMMRGLGGMLPPGMKFPGR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtttgagaatctcaccgacagattgtcccgcaccctgaaaaatatcagtggtcggggt
cgcttgactgaagagaacgtgaaggacaccctgcgcgaagttcgtatggcactgctggag
gccgatgtggctctgcctgtggtgcgggaatttgtcagcagcgtcaaagagcgtgccgtt
ggccaggaagtggccaagagcctgacccctgggcaggtatttgtcaaaatcgttcagagt
gaactggaaaaagccatgggggaagccaacgaggctctcaacctggctgctcagccacct
gctgtattgatgatggcaggactgcagggtgcgggtaaaactaccagtgttgccaagctg
ggtaagttcctgcgtaccagacagaagaagtctgtacttgtggtcagtgccgacgtatac
cgtccggcggcgattaagcagctggaaaccctggccaatgaagtcgaagtcgaatttttc
ccatcggacgtcagccaaaagccggtggatatcgccaatgccgccatcgcttacgccaag
cgtaagtttatcgatgtagtgattctggataccgccggtcgtctgcatgtggacgaggcg
atgatggatgaaatcaaggcactgcacgccgcggtcaagccggttgaaactctatttgtg
gttgacgccatgacaggtcaggatgcggccaataccgctaaggcctttaatgaagcgctg
ccgctgaccggggtgatcctcaccaaggtggatggtgatgccagaggcggtgcagccctg
tccattcgccatatcacaggtaaaccgattaagttcctgggggtgggtgaaaaaacagat
gcgctcgagcctttccacccagacagggtagcttcccgtattctggggatgggtgacgta
ttgtcgctcatcgaagaagttgaacgcggtgttgataaggaaaaagcccttaagctggcc
tctaaagtgaagtccggcggcagctttgaccttgaagacttccgtgagcagctgcagcag
atgaagaatatgggcggcatgatggggatgctggaaaaactacccggtgttggtcaactg
cctcccgatgctttggctcaggtgcaaaacggtaagctcacaggccaaatggaggctatt
attaactccatgacgccaaatgaacgtaagcgtccggatatgatcaagggctcacgaaaa
cgccgcatcgctgccggttccggtactcaaattcaagatgtaaaccgtttgctgaagcag
tttacccagatgcagaaaatgatgaagaaaatgtccgccaaaggcggcatgcataagatg
atgcgcggcctgggcggcatgttgcccccgggaatgaaattccccggtcgctga

DBGET integrated database retrieval system