Staphylococcus chromogenes: DWB92_07490
Help
Entry
DWB92_07490 CDS
T06648
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
schr
Staphylococcus chromogenes
Pathway
schr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB92_07490 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schr03019
]
DWB92_07490 (pnp)
03016 Transfer RNA biogenesis [BR:
schr03016
]
DWB92_07490 (pnp)
Enzymes [BR:
schr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DWB92_07490 (pnp)
Messenger RNA biogenesis [BR:
schr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DWB92_07490 (pnp)
Transfer RNA biogenesis [BR:
schr03016
]
Prokaryotic type
tRNA degradation factors
DWB92_07490 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
SPATA25
DUF5847
Motif
Other DBs
NCBI-ProteinID:
QDW82541
LinkDB
All DBs
Position
complement(1520685..1522790)
Genome browser
AA seq
701 aa
AA seq
DB search
MSQEKMVFKTEWANQPLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPADEATLTARLIDRPIRPLFPDGYHHDVQIMNMVLSA
DPNCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGEYVINPNLEQKAQSRLDLEVA
GHKDAINMVEAGASEITEAEMLDAILFGHQEIQRLCAFQEEIIAHIQPEKHEFVPAEKNE
TLIDSVKAKAEDYKLNDAIQTMEKQAREVNLDAVKETILAEYINEEDPENEALLKEVNSI
INALIKEEVRRLIADEKVRPDGRKPDEIRPLSSEVGLLPRAHGSGLFTRGQTQALSVLTL
GSISEYQIIDGLGEEEHKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DEKTFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDESYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTKEVIEEALEQARQGRLAILEH
MLQTIDQPRAELSAYAPKVEILMIKPEKIRDVIGPGGKQINEIIDATGVKLDIEQDGTVY
IGSTEQEMINQARAWIESIVREAEVGQIYEGKVKRIEKFGAFVELFPGKDALVHISQIAN
ERINKVEDVLKIGDTLKVKVTEIDKQGRVNASHKVLLNSKA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaaaatggtatttaaaacggaatgggcgaaccaaccgttaacaatagaa
acagggcaacttgcaaaacaagcaaatggcgccgtcttagtccgttacggagatactgtt
gtattgtcaacagcgacagcatcgaaagaaccacgtgatggtgactttttccctttaacg
gtcaattatgaagaaaaaatgtatgcagcaggtaaaattccaggaggatttaaaaagcgt
gaaggacgtccagcggatgaagctacattaactgcgcgtcttatcgaccgcccaattcga
ccgttatttcctgatggctatcaccatgatgtacaaatcatgaacatggtattgagtgca
gaccctaattgttctcctgaaatggcagcaatgattggttcttctatggcattgagtgtt
tcagatattccattccaagggcctattgcgggtgtcaacgtgggttatgttgatggggaa
tacgtgatcaatccaaatttagaacaaaaagcgcaatctcgtttagatttagaagtggcg
ggacataaagatgcaattaacatggtagaagcgggggccagtgaaattacagaagcggaa
atgttagatgctattttattcggtcatcaagaaatccaacgtctctgtgctttccaagaa
gagattattgcgcatattcaaccagaaaaacacgaatttgttcctgctgaaaaaaatgaa
actttaattgattcagttaaagccaaagctgaagattataagctgaacgatgcaattcaa
acgatggagaaacaagcccgtgaagtgaatttagatgcggttaaagaaacgattcttgct
gaatatataaatgaagaagatccagaaaatgaagcattacttaaagaagtaaacagcatt
atcaatgccttaattaaagaggaagttcgacgccttatcgccgatgaaaaagtgagacca
gatggccgtaaaccagatgaaattcgtccactatcgtctgaagttgggttactgccacgt
gcgcacggttctggtttatttactcgaggccaaactcaagcattgtcagtattgacttta
ggttcaatttccgaatatcaaattattgatggtttaggtgaagaagaacacaaacgtttt
atgcaccattacaacttcccgaacttctcagtaggggaaactggtcctgtacgtgcacca
gggcgtcgtgaaattgggcatggagcgctcggcgaacgtgctttgagatatattattccg
gacgagaaaacgttcccttatactgtacgtattgtaagtgaagttcttgaatcgaatggc
tcatcttctcaagcatcaatttgtggatctacattggcattaatggatgcaggtgtaccg
ataaaagccccagttgcaggtatcgcaatgggacttgtaacacgagatgaaagttatacg
attttgacagatattcaagggatggaagatgccctaggtgacatggactttaaagttgca
ggaactaaagaaggtattacagccattcaaatggatatcaaaatcgatggattaacgaaa
gaagtgattgaagaagcacttgaacaagcgcgacaagggcgtttagcaattttagaacat
atgttacaaaccatcgatcagccacgtgctgaattaagtgcttacgcacctaaagtagaa
attttaatgattaaaccagaaaaaatcagagatgtcattggaccaggtggtaagcaaatc
aatgaaatcattgatgctacgggtgtaaaattagacattgagcaagatggtacggtatat
atcggatctacagaacaagagatgattaatcaagcgcgtgcttggattgaaagcattgtt
cgtgaagctgaagtgggtcaaatatatgagggtaaagtcaaacgtattgaaaaatttggc
gccttcgttgaattgttcccaggtaaagatgcactcgttcacatttcacaaattgcgaac
gaacgtatcaataaggttgaagatgtcttaaaaattggggatacgttaaaagtaaaagtg
acagaaattgacaaacaaggtcgtgtcaatgcgtctcacaaagtattattaaattctaaa
gcataa
DBGET
integrated database retrieval system
