Siniperca chuatsi (mandarin fish): 122861868
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Entry
122861868 CDS
T08948
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122861868
04082 Neuroactive ligand signaling
122861868
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122861868
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122861868
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122861868
NCBI-ProteinID:
XP_044022812
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Position
LG15:complement(16330269..16345357)
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AA seq
477 aa
AA seq
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MQVDAVLVLFCVWLAGAAGKMAQSRGHKLETYKQSRLRRETRMDGGVGHKSGGPIYKRSP
DMTKSPMTKSEQLLRIDDHDFTMRPAFGGPPIPVGVDVQVESLDTISEVDMDFTMTLYLR
HYWKDERLSFPSNNNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGN
VLYSLRVTVTAMCNMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNESLNTDDRISL
SQFLIQKFHTTTKLAFYSSTGWYNRLYIHFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGIGNPDEMMIDPQITGYGSMDINTTGNYGMPENGGRQE
RMLAQVALNDPQITNQVKPSRGYVNIWIDTHAIDKYSRVVFPGAYILFNIIYWSIYS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggacgctgttcttgtgctcttctgtgtttggctcgcgggtgcagcgggaaag
atggcccagtcgaggggtcacaagctggagacctacaaacagagcaggttgcgaagagag
accagaatggatggaggtgtaggccacaaatccggaggcccgatttacaaacgaagtcca
gacatgacaaaatctcccatgacaaaatctgagcagctcctgagaatagacgaccatgat
tttaccatgaggccagcgtttggaggtcctccgattcctgttggagtagatgttcaggtt
gaaagtctggacaccatctccgaggtggatatggactttaccatgacactgtatctgcgt
cactactggaaggatgagcggctgtcgttcccgagcaacaacaaccagagtatgaccttt
gacagtcgcctggtgaagaagatttgggttcctgacatgttcttcgtacactccaagcgt
tcttttatccacgacaccacgactgataacgtcatgctgagggtttaccctgatggcaac
gtcctctacagtctcagagtcactgtcactgccatgtgcaacatggacctcagccgcttc
cctctggacacccaaacctgctcgctggagattgagagctatgcgtacacagatgacgac
ctgatgttgtactggaagaaaggcaacgaatccctgaacacagacgacagaatatctctg
tcccagttcctcatccagaaatttcacaccaccaccaagctggctttctacagcagcaca
ggctggtacaatcgtttgtacatccacttcaccctgcggcgtcacatcttcttcttcctg
ctgcagacctacttccctgctactctgatggtcatgctgtcctgggtgtccttctggatt
gaccgcagggccgtccccgcgagggtgccactaggcatcaccacagtgctgaccatgtcc
accattatcactggggtcaacgcctccatgccgcgggtctcctacatcaaggcagtggac
atttacctctgggtcagttttgtctttgtcttcctgtcggtgatagagtatgcggcggtc
aactacctctccaccgtacaggagaggaaagagaggaaactgagggagagactgccgtgt
acatgtggcattggcaaccccgatgagatgatgatcgacccccagatcactggctacggg
tctatggatatcaacaccacagggaattatgggatgccagagaacggcggccgccaggag
cgaatgttggcccaggtggcactgaatgacccgcagatcacaaaccaggtgaagccatcc
agaggctacgtgaacatttggatagacacccacgccatagacaagtactcgagggttgtg
tttcctggagcctacatcctctttaacatcatctactggtccatctactcgtaa
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