KEGG   Siniperca chuatsi (mandarin fish): 122863108
Entry
122863108         CDS       T08948                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122863108 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:schu03041]
    122863108 (crnkl1)
   03036 Chromosome and associated proteins [BR:schu03036]
    122863108 (crnkl1)
Spliceosome [BR:schu03041]
 Complex B
  Other components
   Prp19-related factors
    122863108 (crnkl1)
 Complex C
    122863108 (crnkl1)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     122863108 (crnkl1)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT TPR_14 Suf TPR_19 TPR_CcmH_CycH Mad3_BUB1_I U3_assoc_6
Other DBs
NCBI-GeneID: 122863108
NCBI-ProteinID: XP_044025173
LinkDB
Position
LG16:25982934..25993001
AA seq 754 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARTIYERFVMVHPEVKNWIKYARFEEKHGYIAHSRKVYERA
VEFFGEEHVDENLFVAFAKFEETQKEFERVRVIYKYALDRIPKHQAQELFKYYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVENDADPDTVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEVKDPETTRQVYQACLDLIPHKKFTFAKIWLLYAQF
EIRQKNLQGARKVMGTAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFSELETILGDIERARGIFELAIGQPRLDMPEVLWKSYIDFEIEQEEFGNTRNLYKRL
LQRTQHVKVWISYAKFELSIDSPDRLHRCRQIFEEANKSMRNCEEKEERLMLLESWSDFE
KEFGSDSTMERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQMVEEDVPEKAPTAEETSSPSSDETAAPPENLPENDSDRNTATETEQEKTYDDR
DDDDSSSSSSDSDSNDGEKEAKESRSGDEDKDKD
NT seq 2265 nt   +upstreamnt  +downstreamnt
atggcttccacggcggcaggcaaacagcggataccgaaggtggcgaaggtgaagaataaa
gctcccgcagaggttcagatcactgctgagcagctgctgagggaagccaaagagagagag
ctcgaacttctccctccaccaccaaaacagaagatcactgatgaggaggagctgaacgat
tacaaactcaagaagaggaaggggtttgaggacaacatcagaaagaatcgcactgtcatc
agtaactggataaaatacgcacaatgggaggaaagcctgaaggagatccagagggcccgt
tccatttacgagcgagcgctggacgtcgatcaccgcaacatcactctgtggctgaagtat
gccgagatggagatgaagagccggcaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcctcccacgagtcaaccagttctggtacaagtacacctacatggaggagatg
ctggggaacgtcgctggctgcaggcaggtgtttgagcgttggatggagtgggagcctgag
gaacaggcctggcactcctacatcaactttgagctgcgctacaaggaagtggacaaagcc
cgcaccatttatgagcgattcgtcatggttcaccccgaagtgaagaactggatcaagtac
gctcgttttgaagagaagcatggctacatcgctcacagcaggaaggtgtacgagagggcg
gtggagttcttcggagaggaacatgtggacgaaaacctctttgtggcctttgccaagttt
gaggagacgcagaaagagtttgaacgtgttcgggtgatctataagtacgctttggacaga
attcctaaacaccaggcacaggagctcttcaagtactacacgatgttcgagaagaagttt
ggagaccggaggggaatcgaagacgtcattgtcagcaaacgaaggttccagtatgaggag
gaagtcaaggcgaacccacacaactacgacgcgtggtttgattacctccgcctcgtggag
aacgacgctgaccctgacacagtgagagaggtttatgagagagccatcgccaacgtgccc
cccatccaggagaagagacactggaaacgatacatctacctgtggatcaactacgctctg
tacgaagagctggaggtcaaggatcctgagacaacaaggcaggtgtaccaggcctgtctg
gatctcatcccacataaaaagttcacatttgctaagatttggctgctctacgctcagttt
gagatccggcagaagaacctgcagggagctcgaaaggtcatgggtactgcgatcggtaaa
tgcccgaagaacaaactgctgaagggctacatcgagctggagctgcagctgcgcgagttc
gaccgctgcaggaagctgtatgagaaatacctggagttcagtccggagaactgcaccacc
tggatcaagttctcagagctggagacgatcctgggagacatcgagcgagcccgcggcatc
ttcgaactcgccatcggacagccacgactggacatgccagaggtgctgtggaagtcctac
attgactttgagattgagcaggaggagtttggaaacaccagaaacctttacaaaaggctg
ctgcagcgcacacagcatgtcaaggtttggatcagctacgccaagttcgagctgtccatc
gacagccccgacaggctgcacaggtgccggcagatcttcgaggaggccaacaagagcatg
aggaactgcgaggagaaggaggagcggctgatgctgctcgagtcctggagcgactttgag
aaggagttcggctccgacagcaccatggagagagtcaggaagctgctgccagagaaggtg
aagaagaggaggaagctgacggccgaggacgggtcggacgcaggttgggaggagtactac
gactacatcttcccagaggatgccgccaaccagcccaacctcaaactgctggcaatggca
aagatgtggaagaggcagcagatggtggaggaggacgttccagaaaaagctccaacggcc
gaagagacgtcgtcgccgtcctctgacgaaaccgcagctcctcctgaaaacctgccggaa
aacgactccgacagaaacactgcaaccgaaacagagcaggagaagacgtacgacgaccgg
gatgacgacgacagcagcagcagcagcagcgacagtgacagtaatgatggagagaaagag
gcgaaagagagccggagtggagatgaagataaagataaagattag

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