Siniperca chuatsi (mandarin fish): 122863197
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Entry
122863197 CDS
T08948
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122863197 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
schu04050
]
122863197 (tnfrsf21)
04090 CD molecules [BR:
schu04090
]
122863197 (tnfrsf21)
Cytokine receptors [BR:
schu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122863197 (tnfrsf21)
CD molecules [BR:
schu04090
]
Proteins
122863197 (tnfrsf21)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
122863197
NCBI-ProteinID:
XP_044025360
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Position
LG16:6390641..6463199
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AA seq
692 aa
AA seq
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MPAMCVSVVLLCTLVVDISVRVLTTASPADQPLLSPRHYQHTDPDSGTQLVCDKCPAGTY
VSVHCSPTAVRECSPCPEGTFTRGENGVQQCHRCRAPCPAGFIEKALCTATQDRVCKCPP
NSFLSVDGGTECKPHSLCPPGTRVRKRGSESEDVLCKPCTKGTFSDMESSAVKCRTHTNC
QAQGQVLLTPGTRETDNVCGPLSTALTSSSSLSVSTTTILGPVQAVLVQEPMTSSSSPSS
SLAGHVHKGTYSKSAAIQLRENPGGEDHLAEGLLLSWPGAPTPANRDPPRTPPQLMDLEH
QQRQPSSDPVPGPSKRAMEGLEGTEVVRVRTGISKVAGQGSGGGGGGVSSYYRPTRRGSP
RPSTHNHFDINEHLPWMIVLLLLLVLVVIVVCSVKRSSRVLKKGPMQDPSSIMEKAIQKK
PSAPPTQVKEKWIYYSNGQGVDILKLVAAHVGTQWIDIYQSLANATEREVAAFSNGYSSD
HERAYAALQHWTIRDSDANLAKLINALHRQRRIDVVEKIRCVMEDNPQFDINQLMTSVNV
SQSLSPIHKLLESPSSVGSSSNSGGIAGGASGVGVEQSPVDRTKGFFPDESEPLLRCDST
SSKDSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHILNPEELHFIEEILAAED
KLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatgtgtgtgtccgtagtgcttttatgtacattggtggttgacatctcagtt
cgggttttgaccacagccagcccagctgaccagcccctcctctctcctcgccactatcag
cacaccgaccctgactcgggcacccagctggtctgcgacaagtgcccagcaggcacctat
gtgtccgtccactgctccccaacagctgtgagagagtgcagcccctgccctgaaggcacc
ttcacacggggtgagaacggggtccagcaatgccatcggtgtcgggctccatgtcctgcg
ggcttcattgagaaagctctctgcacggccacccaggaccgagtgtgcaaatgtcccccc
aacagcttcttgtcagtagatggtggcacagagtgtaagccccactcgctgtgccctcca
gggaccagggtaagaaagcggggcagtgaatcagaggatgtgctctgtaagccgtgtacc
aagggaactttctcagatatggagtcgagtgcagtgaagtgccgaacccacacaaactgc
caagctcaggggcaggtgctgctcacaccagggactagagagacagataatgtctgtgga
cccctttctacagccctcacttcctcttcatctttgtctgtctccacaaccactatactg
gggcctgtacaggctgtgcttgtacaggaacccatgacttcttcatcctctccatcatca
tcactggctggacatgtacataaaggtacctacagcaagtcagcagccattcaactgagg
gaaaacccgggtggggaagaccaccttgcagagggtctactcctcagctggcctggcgct
cccaccccagcaaatcgtgatcccccacggactccaccgcaactgatggaccttgagcac
cagcagaggcaacccagttctgaccctgtgcctggccccagcaagagggcgatggagggt
ctggagggtacagaggtagtcagggttaggacaggtatcagcaaggtagccgggcagggg
agcggaggtgggggaggtggggtttccagctactacaggcccactcgcagggggtcacca
agaccaagcacccataatcactttgacatcaacgagcaccttccctggatgatagtgctg
ctgctcctactggtgctggtggtgattgtggtctgcagcgtgaagcggagctctcgtgta
ctgaagaaaggccccatgcaggaccctagcagcatcatggagaaggcaattcagaaaaaa
ccatctgcgcctccaacgcaggtgaaagagaagtggatctactactccaatggacagggg
gtggatatcctaaagctggtggcagcccatgtgggcacccagtggatagacatttatcag
tctctggccaacgccacggaaagggaggtggccgcgttctccaatggctactcgtcagat
cacgagcgggcgtatgctgcgctgcagcactggaccatccgggacagtgacgccaacctg
gccaagctgatcaatgccctgcacagacagcggcgcattgatgtggtggagaagatccgc
tgtgtcatggaggacaacccgcagtttgacatcaaccagctgatgacctcagtgaatgta
agccaaagcctcagtcccatccacaagctgcttgagtcccccagcagcgttggcagcagc
agcaacagtggtggtatcgctggcggggccagtggcgtgggcgtggagcaatcaccagtg
gaccgtaccaaaggcttctttcccgacgaatcggagcccctgcttcgctgtgactccacc
tccagcaaagactccgctctcagtaggaacggctccttcattaccaaagagaagaaagac
accgtgctccggcaagtgcgtctggacccgtgtgacctgcagcctatcttcgatgacatg
ctgcacatcctgaacccagaggagctgcacttcatcgaggagatcctggctgctgaggac
aagctggaccggttgtttgagattgcgggagtcaagagtcaggaggccagccagacgctg
ctcgactcggtctatagccacctccctgacctgttatag
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