Siniperca chuatsi (mandarin fish): 122863332
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Entry
122863332 CDS
T08948
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122863332
04082 Neuroactive ligand signaling
122863332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122863332
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122863332
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122863332
NCBI-ProteinID:
XP_044025674
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All DBs
Position
LG16:complement(5063338..5109118)
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AA seq
549 aa
AA seq
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MLRAPELEKAPWSLKSNQSAYQTSPSRLVGALVHHSPSSLTLFLLPLTGRWYRSPSVLHA
DQRRHWPTRSGTFKLIMPCYTRFLLLLLCLILIGECRKHKTRKKRWSAPTETHKPGTPLS
KKVVDGTKTRKVKTSHLLRIDEHDFTMRPAFAGPAVPVGVDVQVESLDSISEVDMDFTMT
LYLRHYWKDERLAFPSSTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTDNIMLRVF
PDGHVLYSLRVTVTAACNMDFSRFPLDSQTCTLELESYAYTDEDLMLYWKSGDESLSTDD
RISLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWV
SFWIDRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLE
YAAVNYLTTVRDGKDRKLREKVREQSQTLPCTCGMSHTRTMMLDGTYSEADANSLAGYTR
ASMAAENASEKQERMVVHLSLDNEPTGTKKKGIRGFRIIQNTHAIDTYSRMIFPGAYILF
NLIYWCVYC
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgctcctgagctagaaaaagccccctggagtctgaagtccaatcagagcgct
tatcagacttcaccatcccgtctcgtcggcgcactcgttcaccacagtccctcgtctctc
acactcttcctcctgcctctgacaggaagatggtaccgttcaccgagcgtcctgcacgcg
gaccaaaggcgtcactggccgactcgctccgggacttttaaactcatcatgccgtgttac
actaggtttctgcttttacttttgtgtttgatcctgatcggggagtgcaggaaacacaaa
actaggaaaaagcggtggtccgcgccgacggagactcacaagcccggcactcctctgtcg
aagaaggttgtggatggaaccaaaacccgaaaagtgaagaccagccaccttctgcgcata
gacgagcatgacttcaccatgaggcctgctttcgcaggtccagctgtccctgttggagtg
gatgttcaggtggaaagcttggacagcatatcagaggtagacatggacttcaccatgacc
ctgtatctgaggcattactggaaggatgagaggctggccttcccaagctccaccaacaag
agcatgacattcgatgggcgccttgtgaagaaaatctgggtgcccgatgtgttcttcgtc
cactctaagaggtctttcatccatgacaccaccactgacaacatcatgctgcgggtcttc
cctgacggtcatgtcctgtacagcctgagggttacagttactgcagcatgcaacatggat
ttcagtcgtttccctttggactcgcagacatgcacactggagctggagagctatgcttac
acagacgaagacctgatgctgtattggaaaagtggtgatgagtccctgagcactgatgac
aggatttctctatctcagttcctcatccaaaagtttcacactacctccagactggctttc
tacagcagcacaggctggtacaaccgtctgtacatcaacttcactctgcggcgtcacatc
ttctttttcctgttgcagacctacttccctgccactctcatggtcatgctgtcctgggtg
tcattctggattgaccgcagggcagtccctgccagagtctcattgggtataaccacagtg
ctcaccatgtccaccatcatcactggagtcaatgcctctatgcccagggtctcctacatc
aaagctgtggatatttacctctgggtcagtttcgtttttgtcttcctgtctgtacttgaa
tacgctgctgtcaactacctgacaacggtgagggacggtaaagaccgcaaactcagagaa
aaagtcagggaacagtctcagacgctcccctgcacctgtggcatgtcccacaccaggact
atgatgttggatgggacatacagtgaggcggatgccaacagcctggcagggtacacaagg
gcctccatggcagctgaaaatgcgtctgaaaaacaggagcgaatggtggtgcatctctcc
ctggataacgagcccacagggactaagaagaagggcatccgcggcttccggatcatccag
aacacccacgccatcgacacctactctcgcatgatcttccctggcgcctacatcctgttt
aacctgatctactggtgtgtgtactgctga
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